RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PBX2P40425 430 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 STAT5BP51692 787 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 GRIK4Q16099 956 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 WASF1Q92558 559 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 FAM161BQ96MY7 647 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 GUCD1Q96NT3 240 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 UIMC1Q96RL1 719 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 COL6A3P12111 3177 aa30.9■■■□□ 2.54
SMAD4-213ENST00000591914 RSPH10B2B2RC85 870 aa30.89■■■□□ 2.54
SMAD4-213ENST00000591914 BAIAP3O94812 1187 aa30.89■■■□□ 2.54
SMAD4-213ENST00000591914 RSPH10BP0C881 870 aa30.89■■■□□ 2.54
SMAD4-213ENST00000591914 TIFAQ96CG3 184 aa30.89■■■□□ 2.54
SMAD4-213ENST00000591914 GJB4Q9NTQ9 266 aa30.89■■■□□ 2.54
SMAD4-213ENST00000591914 MBLAC1A4D2B0 266 aaPredicted RBP30.88■■■□□ 2.53
SMAD4-213ENST00000591914 SLC26A2P50443 739 aa30.88■■■□□ 2.53
SMAD4-213ENST00000591914 PLCB4Q15147 1175 aa30.88■■■□□ 2.53
SMAD4-213ENST00000591914 MARCH8Q5T0T0 291 aa30.88■■■□□ 2.53
SMAD4-213ENST00000591914 ZNF746Q6NUN9 644 aaPredicted RBP30.88■■■□□ 2.53
SMAD4-213ENST00000591914 CNKSR3Q6P9H4 555 aa30.88■■■□□ 2.53
SMAD4-213ENST00000591914 KRT25Q7Z3Z0 450 aa30.88■■■□□ 2.53
SMAD4-213ENST00000591914 NSUN7Q8NE18 718 aaKnown RBP30.88■■■□□ 2.53
SMAD4-213ENST00000591914 GBF1Q92538 1859 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 CYP3A7-CYP3A51PA0A087WV96 503 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 MSH4O15457 936 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 ATP2A2P16615 1042 aaKnown RBP30.87■■■□□ 2.53
SMAD4-213ENST00000591914 CYP3A7P24462 503 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 RBM25P49756 843 aaKnown RBP30.87■■■□□ 2.53
SMAD4-213ENST00000591914 KRT76Q01546 638 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 NONOQ15233 471 aaKnown RBP eCLIP30.87■■■□□ 2.53
SMAD4-213ENST00000591914 RAB30Q15771 203 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 TAF2Q6P1X5 1199 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 RPAINQ86UA6 219 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 TUBE1Q9UJT0 475 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 LIMCH1Q9UPQ0 1083 aa30.87■■■□□ 2.53
SMAD4-213ENST00000591914 RRN3P2A6NIE6 340 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 INSRRP14616 1297 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 ST3GAL1Q11201 340 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 Q4G0T1 1027 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 MIS18BP1Q6P0N0 1132 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 RUFY4Q6ZNE9 571 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 CCDC60Q8IWA6 550 aaPredicted RBP30.86■■■□□ 2.53
SMAD4-213ENST00000591914 SMAP1Q8IYB5 467 aaPredicted RBP30.86■■■□□ 2.53
SMAD4-213ENST00000591914 TNPO1Q92973 898 aaKnown RBP30.86■■■□□ 2.53
SMAD4-213ENST00000591914 TRPC6Q9Y210 931 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 STXBP5LQ9Y2K9 1186 aa30.86■■■□□ 2.53
SMAD4-213ENST00000591914 CHD9Q3L8U1 2897 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 BACH1O14867 736 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 TCTN1Q2MV58 587 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 FAM160B1Q5W0V3 765 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 MOXD1Q6UVY6 613 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 PHOSPHO2Q8TCD6 241 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 SLC5A5Q92911 643 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 MBOAT7Q96N66 472 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 SLC9A7Q96T83 725 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 RIT2Q99578 217 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 MSRAQ9UJ68 235 aa30.85■■■□□ 2.53
SMAD4-213ENST00000591914 POTEB3A0JP26 581 aa30.84■■■□□ 2.53
SMAD4-213ENST00000591914 TDP2O95551 362 aa30.84■■■□□ 2.53
SMAD4-213ENST00000591914 CTSHP09668 335 aa30.84■■■□□ 2.53
SMAD4-213ENST00000591914 FAM26DQ5JW98 314 aa30.84■■■□□ 2.53
SMAD4-213ENST00000591914 POTEBQ6S5H4 581 aa30.84■■■□□ 2.53
SMAD4-213ENST00000591914 ZNF302Q9NR11 478 aa30.84■■■□□ 2.53
SMAD4-213ENST00000591914 TCEAL9Q9UHQ7 104 aa30.84■■■□□ 2.53
SMAD4-213ENST00000591914 JAK2O60674 1132 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 IGBP1P78318 339 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 INF2Q27J81 1249 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 SWSAP1Q6NVH7 229 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 OXER1Q8TDS5 423 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 CDX2Q99626 313 aaPredicted RBP30.83■■■□□ 2.53
SMAD4-213ENST00000591914 ZNF576Q9H609 170 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 YBX2Q9Y2T7 364 aaKnown RBP30.83■■■□□ 2.53
SMAD4-213ENST00000591914 PCDHA11Q9Y5I1 949 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 PCDHA10Q9Y5I2 948 aa30.83■■■□□ 2.53
SMAD4-213ENST00000591914 CCDC194A0A1B0GVG4 234 aa30.82■■■□□ 2.52
SMAD4-213ENST00000591914 ABHD14A-ACY1A0A1B0GW23 586 aa30.82■■■□□ 2.52
SMAD4-213ENST00000591914 RABGGTBP53611 331 aa30.82■■■□□ 2.52
SMAD4-213ENST00000591914 WDR5P61964 334 aaKnown RBP30.82■■■□□ 2.52
SMAD4-213ENST00000591914 PDXDC2PQ6P474 469 aa30.82■■■□□ 2.52
SMAD4-213ENST00000591914 ATP8B4Q8TF62 1192 aa30.82■■■□□ 2.52
SMAD4-213ENST00000591914 MAFBQ9Y5Q3 323 aaPredicted RBP30.82■■■□□ 2.52
SMAD4-213ENST00000591914 PSAPP07602 524 aa30.81■■■□□ 2.52
SMAD4-213ENST00000591914 PLEKHG4Q58EX7 1191 aa30.81■■■□□ 2.52
SMAD4-213ENST00000591914 PTPRSQ13332 1948 aa30.81■■■□□ 2.52
SMAD4-213ENST00000591914 WDR64B1ANS9 1081 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 RBAK-RBAKDNI3L0D1 243 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 HBP1O60381 514 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 GAS7O60861 476 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 EFCAB14O75071 495 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 ATP4AP20648 1035 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 KCNJ6P48051 423 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 IKBKEQ14164 716 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 LRCH2Q5VUJ6 765 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 RSPH3Q86UC2 560 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 HERC6Q8IVU3 1022 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 DBF4BQ8NFT6 615 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 TRAPPC12Q8WVT3 735 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 ZBTB10Q96DT7 871 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 OSBPL7Q9BZF2 842 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 NKX2-4Q9H2Z4 354 aa30.8■■■□□ 2.52
SMAD4-213ENST00000591914 PSMD10O75832 226 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms