RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 BAATQ14032 418 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 TRIM29Q14134 588 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 TLR1Q15399 786 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 NTRK3Q16288 839 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 CCL14Q16627 93 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 SH3PXD2AQ5TCZ1 1133 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 FBXO46Q6PJ61 603 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 FCHSD1Q86WN1 690 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 ABRAQ8N0Z2 381 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 ZNF713Q8N859 430 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 FAM184AQ8NB25 1140 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 SMARCC2Q8TAQ2 1214 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 SH3TC2Q8TF17 1288 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 CCDC12Q8WUD4 166 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 TRIB2Q92519 343 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 WASF1Q92558 559 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 ALKBH8Q96BT7 664 aaKnown RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 ALG1Q9BT22 464 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 BARHL2Q9NY43 387 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 PTPN22Q9Y2R2 807 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 DDX49Q9Y6V7 483 aaKnown RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 SERTM1A2A2V5 107 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 GCOM1H8Y6P7 765 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 EML1O00423 815 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 OPLAHO14841 1288 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 STRNO43815 780 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 COBLO75128 1261 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 POLR2MP0CAP2 368 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 XBP1P17861 261 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 EIF2AK2P19525 551 aaKnown RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 GRK4P32298 578 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 CYP2C19P33261 490 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 ALDH5A1P51649 535 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 NLRP5P59047 1200 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 UBXN2AP68543 259 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 HMGN5P82970 282 aaKnown RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 DAB2P98082 770 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 GUCY1B3Q02153 619 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 TEAD4Q15561 434 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 PKN1Q16512 942 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 USP17L6PQ6QN14 398 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 LIAT1Q6ZQX7 453 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 REXO1Q8N1G1 1221 aaKnown RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 KDF1Q8NAX2 398 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 NPLOC4Q8TAT6 608 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 RASGRP4Q8TDF6 673 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 SYTL5Q8TDW5 730 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 MAML3Q96JK9 1138 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 PGBD1Q96JS3 809 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 MPHOSPH6Q99547 160 aaKnown RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 LLPHQ9BRT6 129 aaKnown RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 NIF3L1Q9GZT8 377 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 MCOLN1Q9GZU1 580 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 PSTPIP2Q9H939 334 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 EHMT1Q9H9B1 1298 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 C6orf50Q9HD87 102 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 COL20A1Q9P218 1284 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 ZHX1Q9UKY1 873 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-205ENST00000591383 POLIQ9UNA4 740 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 KCNJ14Q9UNX9 436 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 SMC3Q9UQE7 1217 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 KIF3AQ9Y496 699 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 MYH7BA7E2Y1 1941 aa7.32□□□□□ -1.24
VPS4B-205ENST00000591383 ASTN1O14525 1302 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 KIAA1217Q5T5P2 1943 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 DNAJC25-GNG10A0A024R161 153 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 SMCO2A6NFE2 343 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 SPDYE3A6NKU9 549 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 HOXC6P09630 235 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 GJB2P29033 226 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 NOS2P35228 1153 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 HSD17B4P51659 736 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 GNL2Q13823 731 aaKnown RBP7.31□□□□□ -1.24
VPS4B-205ENST00000591383 PKN2Q16513 984 aaKnown RBP7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ZNF792Q3KQV3 632 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 COL13A1Q5TAT6 717 aaPredicted RBP7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ARHGEF16Q5VV41 709 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 JAKMIP3Q5VZ66 844 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 MFSD14CQ5VZR4 134 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ARMCX2Q7L311 632 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 EEPD1Q7L9B9 569 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 FBXO16Q8IX29 292 aaPredicted RBP7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ETFBKMTQ8IXQ9 262 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ALDH16A1Q8IZ83 802 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 GJD3Q8N144 294 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 FAM133AQ8N9E0 248 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 TMEM87AQ8NBN3 555 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 IL31RAQ8NI17 732 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 BICD2Q8TD16 824 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ZDHHC1Q8WTX9 485 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 TBC1D5Q92609 795 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 USP6NLQ92738 828 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 SHISA4Q96DD7 197 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 C8orf76Q96K31 380 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 FGD4Q96M96 766 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 RMDN3Q96TC7 470 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 RIC8AQ9NPQ8 531 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 PXMP2Q9NR77 195 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms