RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 KRT40Q6A162 431 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 LMBR1Q8WVP7 490 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 GTF3C6Q969F1 213 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 UBIAD1Q9Y5Z9 338 aa20.49■□□□□ 0.87
VAT1-208ENST00000590924 TTC3P53804 2025 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 LINC01553A4QN01 128 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 hCG_1984214I3L0E3 225 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 ATP9AO75110 1047 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 AMHP03971 560 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 ITGB5P18084 799 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 TCF7P36402 384 aaPredicted RBP20.48■□□□□ 0.87
VAT1-208ENST00000590924 ERVK-21P61565 698 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 AKAP17AQ02040 695 aaKnown RBP20.48■□□□□ 0.87
VAT1-208ENST00000590924 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.48■□□□□ 0.87
VAT1-208ENST00000590924 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 ZNF713Q8N859 430 aaPredicted RBP20.48■□□□□ 0.87
VAT1-208ENST00000590924 TGS1Q96RS0 853 aaKnown RBP20.48■□□□□ 0.87
VAT1-208ENST00000590924 LMCD1Q9NZU5 365 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 INSL6Q9Y581 213 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 NRCAMQ92823 1304 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 EVPLQ92817 2033 aa20.48■□□□□ 0.87
VAT1-208ENST00000590924 CTSHP09668 335 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 HTRA4P83105 476 aaPredicted RBP20.47■□□□□ 0.87
VAT1-208ENST00000590924 TFF2Q03403 129 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 SSRP1Q08945 709 aaKnown RBP20.47■□□□□ 0.87
VAT1-208ENST00000590924 MTMR1Q13613 665 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 TEX2Q8IWB9 1127 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 MYOCDQ8IZQ8 938 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 GDPD5Q8WTR4 605 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 SEPT8Q92599 483 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 UHRF1Q96T88 793 aaPredicted RBP20.47■□□□□ 0.87
VAT1-208ENST00000590924 EHMT1Q9H9B1 1298 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 SUGCTQ9HAC7 445 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 PCDHA6Q9UN73 950 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 COG5Q9UP83 839 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 PCDHA8Q9Y5H6 950 aa20.47■□□□□ 0.87
VAT1-208ENST00000590924 RBAK-RBAKDNI3L0D1 243 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 MAFGO15525 162 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 LARGE1O95461 756 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 BMP1P13497 986 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 ARHGAP4P98171 946 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 PFKFB3Q16875 520 aaPredicted RBP20.46■□□□□ 0.87
VAT1-208ENST00000590924 FAM26DQ5JW98 314 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 FAM117BQ6P1L5 589 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 RPAINQ86UA6 219 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 SEPT1Q8WYJ6 367 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
VAT1-208ENST00000590924 JADE2Q9NQC1 790 aa20.46■□□□□ 0.87
VAT1-208ENST00000590924 GSTTP1A0A1W2PQM5 241 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 WWC2Q6AWC2 1192 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 FAM177A1Q8N128 213 aaPredicted RBP20.45■□□□□ 0.86
VAT1-208ENST00000590924 NECAB1Q8N987 351 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 SP7Q8TDD2 431 aaPredicted RBP20.45■□□□□ 0.86
VAT1-208ENST00000590924 APBB2Q92870 758 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 SNX21Q969T3 373 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 OSBPL7Q9BZF2 842 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 ERAP1Q9NZ08 941 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 MTUS1Q9ULD2 1270 aa20.45■□□□□ 0.86
VAT1-208ENST00000590924 CD2BP2O95400 341 aaKnown RBP20.44■□□□□ 0.86
VAT1-208ENST00000590924 SCG2P13521 617 aa20.44■□□□□ 0.86
VAT1-208ENST00000590924 PKN1Q16512 942 aa20.44■□□□□ 0.86
VAT1-208ENST00000590924 PPP1R18Q6NYC8 613 aa20.44■□□□□ 0.86
VAT1-208ENST00000590924 TAF2Q6P1X5 1199 aa20.44■□□□□ 0.86
VAT1-208ENST00000590924 PHKBQ93100 1093 aa20.44■□□□□ 0.86
VAT1-208ENST00000590924 SLC26A6Q9BXS9 759 aa20.44■□□□□ 0.86
VAT1-208ENST00000590924 STK36Q9NRP7 1315 aa20.44■□□□□ 0.86
VAT1-208ENST00000590924 MYO7AQ13402 2215 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 BDP1A6H8Y1 2624 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 DEXIO95424 95 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 CTDNEP1O95476 244 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 KCNQ1P51787 676 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 NAPAP54920 295 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 PPFIA1Q13136 1202 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 TYW1BQ6NUM6 668 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 TOP1MTQ969P6 601 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 TMX3Q96JJ7 454 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 IFIH1Q9BYX4 1025 aaKnown RBP20.43■□□□□ 0.86
VAT1-208ENST00000590924 SMARCAD1Q9H4L7 1026 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 RIC8AQ9NPQ8 531 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 SH3GLB2Q9NR46 395 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 BARHL2Q9NY43 387 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 PKD2L1Q9P0L9 805 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 TUBE1Q9UJT0 475 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 KIAA1671Q9BY89 1806 aa20.43■□□□□ 0.86
VAT1-208ENST00000590924 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.42■□□□□ 0.86
VAT1-208ENST00000590924 MBLAC1A4D2B0 266 aaPredicted RBP20.42■□□□□ 0.86
VAT1-208ENST00000590924 FOSP01100 380 aaPredicted RBP20.42■□□□□ 0.86
VAT1-208ENST00000590924 MARK3P27448 753 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 GRIK4Q16099 956 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 NSUN7Q8NE18 718 aaKnown RBP20.42■□□□□ 0.86
VAT1-208ENST00000590924 CCDC12Q8WUD4 166 aaPredicted RBP20.42■□□□□ 0.86
VAT1-208ENST00000590924 WASF1Q92558 559 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 GLG1Q92896 1179 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 HLA-CQ95604 372 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 SAMD11Q96NU1 681 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 MXRA8Q9BRK3 442 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 GLT8D2Q9H1C3 349 aa20.42■□□□□ 0.86
VAT1-208ENST00000590924 JPH1Q9HDC5 661 aaPredicted RBP20.42■□□□□ 0.86
VAT1-208ENST00000590924 KCNH7Q9NS40 1196 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms