RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 YME1L1Q96TA2 773 aa12.57□□□□□ -0.4
GFAP-217ENST00000590922 NSUN3Q9H649 340 aaKnown RBP12.57□□□□□ -0.4
GFAP-217ENST00000590922 RALGAPA2Q2PPJ7 1873 aa12.57□□□□□ -0.4
GFAP-217ENST00000590922 TRIOO75962 3097 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 RBAK-RBAKDNI3L0D1 243 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 STXBP3O00186 592 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 CCND2P30279 289 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 NAPAP54920 295 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 HIC1Q14526 733 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 PKN1Q16512 942 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 SEPT8Q92599 483 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 TOP1MTQ969P6 601 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
GFAP-217ENST00000590922 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 COL4A6Q14031 1691 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 FRMPD4Q14CM0 1322 aa12.56□□□□□ -0.4
GFAP-217ENST00000590922 PRPF3O43395 683 aaKnown RBP12.55□□□□□ -0.4
GFAP-217ENST00000590922 NCK2O43639 380 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 SCG2P13521 617 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 IFNAR1P17181 557 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 AK2P54819 239 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 MRPS9P82933 396 aaKnown RBP12.55□□□□□ -0.4
GFAP-217ENST00000590922 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
GFAP-217ENST00000590922 MYSM1Q5VVJ2 828 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 KCNV1Q6PIU1 500 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 HFE2Q6ZVN8 426 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 ATP6V0A1Q93050 837 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 SPATA33Q96N06 139 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 SLC26A6Q9BXS9 759 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 CLDND1Q9NY35 253 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 RTEL1Q9NZ71 1219 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 TPCN1Q9ULQ1 816 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 C5orf42Q9H799 3197 aa12.55□□□□□ -0.4
GFAP-217ENST00000590922 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 SMCO2A6NFE2 343 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 ADAMTS3O15072 1205 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 SORBS3O60504 671 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 DTNBO60941 627 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 UPP2O95045 317 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 IRS1P35568 1242 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 ADCY7P51828 1080 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 NEK4P51957 841 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 AKAP17AQ02040 695 aaKnown RBP12.54□□□□□ -0.4
GFAP-217ENST00000590922 HSDL1Q3SXM5 330 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 CELF3Q5SZQ8 465 aaKnown RBP12.54□□□□□ -0.4
GFAP-217ENST00000590922 PPP1R18Q6NYC8 613 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 PGBD1Q96JS3 809 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 MFSD14AQ96MC6 490 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 POP1Q99575 1024 aaKnown RBP12.54□□□□□ -0.4
GFAP-217ENST00000590922 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 IFIH1Q9BYX4 1025 aaKnown RBP12.54□□□□□ -0.4
GFAP-217ENST00000590922 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
GFAP-217ENST00000590922 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.53□□□□□ -0.4
GFAP-217ENST00000590922 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 hCG_1984214I3L0E3 225 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 CPLX1O14810 134 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 CAND2O75155 1236 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 GGPS1O95749 300 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 HOXC8P31273 242 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 LTBRP36941 435 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 SP2Q02086 613 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 SCRN1Q12765 414 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 SMAD2Q15796 467 aaKnown RBP12.53□□□□□ -0.4
GFAP-217ENST00000590922 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 ZNF713Q8N859 430 aaPredicted RBP12.53□□□□□ -0.4
GFAP-217ENST00000590922 RNF26Q9BY78 433 aaPredicted RBP12.53□□□□□ -0.4
GFAP-217ENST00000590922 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
GFAP-217ENST00000590922 BCAS3Q9H6U6 928 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 TMEM260Q9NX78 707 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
GFAP-217ENST00000590922 TECTAO75443 2155 aa12.52□□□□□ -0.4
GFAP-217ENST00000590922 C5orf67F2Z3F1 127 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 H3BRB1 525 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 TREHO43280 583 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 PFKFB2O60825 505 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 LARGE1O95461 756 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 CTSHP09668 335 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 TGFB3P10600 412 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 CTNNB1P35222 781 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
GFAP-217ENST00000590922 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 HERC4Q5GLZ8 1057 aaPredicted RBP12.52□□□□□ -0.41
GFAP-217ENST00000590922 FIBCD1Q8N539 461 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 APBB2Q92870 758 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 INPP4AQ96PE3 977 aaPredicted RBP12.52□□□□□ -0.41
GFAP-217ENST00000590922 KIF2CQ99661 725 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 C11orf84Q9BUA3 381 aaPredicted RBP12.52□□□□□ -0.41
GFAP-217ENST00000590922 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
GFAP-217ENST00000590922 MLXIPQ9HAP2 919 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
GFAP-217ENST00000590922 KAT6AQ92794 2004 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms