RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ITGB3BPQ13352 177 aaPredicted RBP24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 GNL2Q13823 731 aaKnown RBP24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 CELF3Q5SZQ8 465 aaKnown RBP24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 KCNV1Q6PIU1 500 aa24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 NIPA1Q7RTP0 329 aa24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 GJA10Q969M2 543 aa24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 MBOAT7Q96N66 472 aa24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 COG5Q9UP83 839 aa24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 GBF1Q92538 1859 aa24.34■■□□□ 1.49
R3HDM4-206ENST00000590454 RFXAPO00287 272 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 NKRFO15226 690 aaKnown RBP eCLIP24.33■■□□□ 1.492e-6■■■■□ 24.3
R3HDM4-206ENST00000590454 SLC37A4O43826 429 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 GH1P01241 217 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 CA3P07451 260 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 ACTN1P12814 892 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 ATP2B1P20020 1258 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 BECN1Q14457 450 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 MYSM1Q5VVJ2 828 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 CYFIP1Q7L576 1253 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 AFG1LQ8WV93 481 aa24.33■■□□□ 1.49
R3HDM4-206ENST00000590454 CCNT1O60563 726 aaKnown RBP24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 PDCP20941 246 aa24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 NBR1Q14596 966 aa24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 DEFB128Q7Z7B8 93 aa24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 FERMT3Q86UX7 667 aa24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 DHX37Q8IY37 1157 aaKnown RBP24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 TRMT13Q9NUP7 481 aaKnown RBP24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 POLR3EQ9NVU0 708 aa24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 MTMR6Q9Y217 621 aa24.32■■□□□ 1.48
R3HDM4-206ENST00000590454 MSH4O15457 936 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 CYP2C9P11712 490 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 TOB1P50616 345 aaPredicted RBP24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 Q4G0T1 1027 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 PHOSPHO2Q8TCD6 241 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 CDHR1Q96JP9 859 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 SLC9A7Q96T83 725 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 SENP7Q9BQF6 1050 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 LRFN3Q9BTN0 628 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 EPHX3Q9H6B9 360 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 CERS4Q9HA82 394 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 DDX25Q9UHL0 483 aaKnown RBP24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 HCN4Q9Y3Q4 1203 aa24.31■■□□□ 1.48
R3HDM4-206ENST00000590454 MAFGO15525 162 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 DHX15O43143 795 aaKnown RBP24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 SP4Q02446 784 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 HSDL1Q3SXM5 330 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 PPP4R3AQ6IN85 833 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 MOXD1Q6UVY6 613 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 EMID1Q96A84 441 aaPredicted RBP24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 ZNF577Q9BSK1 485 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 MLXIPQ9HAP2 919 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 TSHZ2Q9NRE2 1034 aa24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 TCF20Q9UGU0 1960 aaKnown RBP24.3■■□□□ 1.48
R3HDM4-206ENST00000590454 IPO5O00410 1097 aaKnown RBP24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 STX6O43752 255 aa24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 RFC2P35250 354 aa24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 SETQ01105 290 aaPredicted RBP24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 LAMC2Q13753 1193 aa24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 PKP1Q13835 747 aa24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 NEDD9Q14511 834 aa24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 SPATA33Q96N06 139 aa24.29■■□□□ 1.48
R3HDM4-206ENST00000590454 A6NJR5 290 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 DDX39AO00148 427 aaKnown RBP24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 TLL1O43897 1013 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 MMP3P08254 477 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 CPT1AP50416 773 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 PURAQ00577 322 aaKnown RBP24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 RESTQ13127 1097 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 METTL7BQ6UX53 244 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 POTEDQ86YR6 584 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 ETNPPLQ8TBG4 499 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 HLA-CQ95604 372 aa24.28■■□□□ 1.48
R3HDM4-206ENST00000590454 NCOR1O75376 2440 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 EPOPA6NHQ4 379 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 MYL3P08590 195 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 ZNF174Q15697 407 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 TMEM31Q5JXX7 168 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 FOXD4L5Q5VV16 416 aaPredicted RBP24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 PPTC7Q8NI37 304 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 FOXD4L4Q8WXT5 416 aaPredicted RBP24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 ARNTL2Q8WYA1 636 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 HAS1Q92839 578 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 SLC5A5Q92911 643 aa24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 MTG1Q9BT17 334 aaPredicted RBP24.27■■□□□ 1.48
R3HDM4-206ENST00000590454 CHD7Q9P2D1 2997 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 CCNE2O96020 404 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 GCFC2P16383 781 aaKnown RBP24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 MCM7P33993 719 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 TAP1Q03518 808 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 TTC38Q5R3I4 469 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 FAM173BQ6P4H8 233 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 RETREG2Q8NC44 543 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 GPR20Q99678 358 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 TMEM60Q9H2L4 133 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 KCNMB3Q9NPA1 279 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 PCDHB6Q9Y5E3 794 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 NFASCO94856 1347 aa24.26■■□□□ 1.47
R3HDM4-206ENST00000590454 GSTTP1A0A1W2PQM5 241 aa24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 BRDTQ58F21 947 aaPredicted RBP24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 FAM47CQ5HY64 1035 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms