RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ERAP1	Q9NZ08	941 aa		19.64	■□□□□ 0.73
MBD1-221	ENST00000589867	MYH9	P35579	1960 aa	Known RBP	19.64	■□□□□ 0.73
MBD1-221	ENST00000589867	CDH23	Q9H251	3354 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	WNT7A	O00755	349 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	NBN	O60934	754 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	MMP1	P03956	469 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	SELP	P16109	830 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	KRT40	Q6A162	431 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	PLPPR4	Q7Z2D5	763 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	GLG1	Q92896	1179 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	ZBTB10	Q96DT7	871 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	LLPH	Q9BRT6	129 aa	Known RBP	19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	SH2B1	Q9NRF2	756 aa	Predicted RBP	19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	TBC1D22B	Q9NU19	505 aa		19.63	■□□□□ 0.73
MBD1-221	ENST00000589867	SI	P14410	1827 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	NRCAM	Q92823	1304 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	MBLAC1	A4D2B0	266 aa	Predicted RBP	19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	BTBD18	B2RXH4	712 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	PSMD10	O75832	226 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	XBP1	P17861	261 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	STAT5B	P51692	787 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	ZNF746	Q6NUN9	644 aa	Predicted RBP	19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	PSRC1	Q6PGN9	363 aa	Predicted RBP	19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	RUFY4	Q6ZNE9	571 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	PIK3AP1	Q6ZUJ8	805 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	LRRC8D	Q7L1W4	858 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	DEFB128	Q7Z7B8	93 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	PTPRS	Q13332	1948 aa		19.62	■□□□□ 0.73
MBD1-221	ENST00000589867	FGB	P02675	491 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	CXCL10	P02778	98 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	INSRR	P14616	1297 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	KRT2	P35908	639 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	PPFIA1	Q13136	1202 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	GRIK4	Q16099	956 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	OTOP2	Q7RTS6	562 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	RETREG2	Q8NC44	543 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	UNC45A	Q9H3U1	944 aa		19.61	■□□□□ 0.73
MBD1-221	ENST00000589867	GBF1	Q92538	1859 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	CCDC194	A0A1B0GVG4	234 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	GRXCR1	A8MXD5	290 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	ZBTB42	B2RXF5	422 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	RFC2	P35250	354 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	GUCY1B3	Q02153	619 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	LETM2	Q2VYF4	491 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	GPR153	Q6NV75	609 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	SWSAP1	Q6NVH7	229 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867		Q7L0L9	218 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	NEK8	Q86SG6	692 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	DIS3L2	Q8IYB7	885 aa	Known RBP	19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	RPUSD2	Q8IZ73	545 aa	Known RBP	19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	TRAPPC12	Q8WVT3	735 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	TMX3	Q96JJ7	454 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	RIT2	Q99578	217 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	KCNMB3	Q9NPA1	279 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	DDX25	Q9UHL0	483 aa	Known RBP	19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	MAFB	Q9Y5Q3	323 aa	Predicted RBP	19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	CHD7	Q9P2D1	2997 aa		19.6	■□□□□ 0.73
MBD1-221	ENST00000589867	ZNF862	O60290	1169 aa		19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	SMAD3	P84022	425 aa	Known RBP	19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	KRT76	Q01546	638 aa		19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	PPP4R3A	Q6IN85	833 aa		19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	CCDC155	Q8N6L0	562 aa		19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	HAS1	Q92839	578 aa		19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	AZI2	Q9H6S1	392 aa		19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	UPF2	Q9HAU5	1272 aa	Known RBP	19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	EVPL	Q92817	2033 aa		19.59	■□□□□ 0.73
MBD1-221	ENST00000589867	IGSF9B	Q9UPX0	1349 aa		19.58	■□□□□ 0.73
MBD1-221	ENST00000589867	PFKM	P08237	780 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	GNAT1	P11488	350 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	THPO	P40225	353 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	MKRN4P	Q13434	485 aa	Predicted RBP	19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	UGCG	Q16739	394 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	FAM26D	Q5JW98	314 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	LRCH2	Q5VUJ6	765 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	MIS18BP1	Q6P0N0	1132 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	RPAIN	Q86UA6	219 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	SMAP1	Q8IYB5	467 aa	Predicted RBP	19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	ZNF302	Q9NR11	478 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	VAV3	Q9UKW4	847 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	PCDHA10	Q9Y5I2	948 aa		19.58	■□□□□ 0.72
MBD1-221	ENST00000589867	MYO9B	Q13459	2157 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	POTEB3	A0JP26	581 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	GAS7	O60861	476 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	CHRNA1	P02708	482 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	PBX2	P40425	430 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	IGBP1	P78318	339 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	MGAT3	Q09327	533 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	PDXDC2P	Q6P474	469 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	POTEB	Q6S5H4	581 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	FBXO18	Q8NFZ0	1043 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	ATP8B4	Q8TF62	1192 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	DISC1	Q9NRI5	854 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	GABBR1	Q9UBS5	961 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	TUBE1	Q9UJT0	475 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	COL6A3	P12111	3177 aa		19.57	■□□□□ 0.72
MBD1-221	ENST00000589867	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	WDR64	B1ANS9	1081 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	RSPH10B2	B2RC85	870 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	EML1	O00423	815 aa		19.56	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms