RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 POTEB3A0JP26 581 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 H3BQ06 376 aaPredicted RBP16.04■□□□□ 0.16
VMP1-209ENST00000588915 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
VMP1-209ENST00000588915 PLEKHA8P1O95397 391 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 CTNNB1P35222 781 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 NAALADL2Q58DX5 795 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 MARCH8Q5T0T0 291 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 IER5Q5VY09 327 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 POTEBQ6S5H4 581 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 RUFY4Q6ZNE9 571 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 TSHZ1Q6ZSZ6 1077 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 MYL10Q9BUA6 226 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 UPF3BQ9BZI7 483 aaKnown RBP16.04■□□□□ 0.16
VMP1-209ENST00000588915 TTC3P53804 2025 aa16.04■□□□□ 0.16
VMP1-209ENST00000588915 C19orf67A6NJJ6 358 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 DGKIO75912 1065 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 LTBRP36941 435 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 MRPS6P82932 125 aaKnown RBP16.03■□□□□ 0.16
VMP1-209ENST00000588915 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 P2RX5Q93086 422 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 CLDND1Q9NY35 253 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 PCDHA6Q9UN73 950 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 PCDHA8Q9Y5H6 950 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 CDY2AQ9Y6F7 541 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 NLRC5Q86WI3 1866 aa16.03■□□□□ 0.16
VMP1-209ENST00000588915 DCXO43602 365 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 INSRRP14616 1297 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 ZP2Q05996 745 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 BTG3Q14201 252 aaPredicted RBP16.02■□□□□ 0.16
VMP1-209ENST00000588915 PLPPR4Q7Z2D5 763 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 ADHFE1Q8IWW8 467 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 CRIPAKQ8N1N5 446 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 NME8Q8N427 588 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 FANCBQ8NB91 859 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 AZI2Q9H6S1 392 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.16
VMP1-209ENST00000588915 SLC9A2Q9UBY0 812 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.16
VMP1-209ENST00000588915 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.16
VMP1-209ENST00000588915 NFASCO94856 1347 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 MYO7AQ13402 2215 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 FAM86C2PA6NEL3 165 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 RBAK-RBAKDNI3L0D1 243 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 GRM6O15303 877 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 FOSP01100 380 aaPredicted RBP16.01■□□□□ 0.15
VMP1-209ENST00000588915 MMP1P03956 469 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 MARK3P27448 753 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 SMAD2Q15796 467 aaKnown RBP16.01■□□□□ 0.15
VMP1-209ENST00000588915 TMTC3Q6ZXV5 915 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 CMTR2Q8IYT2 770 aaKnown RBP16.01■□□□□ 0.15
VMP1-209ENST00000588915 PPP2R3CQ969Q6 453 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
VMP1-209ENST00000588915 PCYT2Q99447 389 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 POP1Q99575 1024 aaKnown RBP16.01■□□□□ 0.15
VMP1-209ENST00000588915 MXRA8Q9BRK3 442 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 LSG1Q9H089 658 aaKnown RBP16.01■□□□□ 0.15
VMP1-209ENST00000588915 KCNH6Q9H252 994 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 KCNH7Q9NS40 1196 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 PCDHA2Q9Y5H9 948 aa16.01■□□□□ 0.15
VMP1-209ENST00000588915 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
VMP1-209ENST00000588915 SMIM35A0A1B0GVV1 85 aa16■□□□□ 0.15
VMP1-209ENST00000588915 M0QZ92 97 aa16■□□□□ 0.15
VMP1-209ENST00000588915 SLC27A2O14975 620 aa16■□□□□ 0.15
VMP1-209ENST00000588915 STAG3L1P0CL83 205 aa16■□□□□ 0.15
VMP1-209ENST00000588915 SLC26A2P50443 739 aa16■□□□□ 0.15
VMP1-209ENST00000588915 HYAL1Q12794 435 aa16■□□□□ 0.15
VMP1-209ENST00000588915 NECTIN1Q15223 517 aa16■□□□□ 0.15
VMP1-209ENST00000588915 UBE2SQ16763 222 aa16■□□□□ 0.15
VMP1-209ENST00000588915 CSPP1Q1MSJ5 1256 aa16■□□□□ 0.15
VMP1-209ENST00000588915 SYNE3Q6ZMZ3 975 aa16■□□□□ 0.15
VMP1-209ENST00000588915 EP400NLQ6ZTU2 488 aa16■□□□□ 0.15
VMP1-209ENST00000588915 NPAS4Q8IUM7 802 aa16■□□□□ 0.15
VMP1-209ENST00000588915 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
VMP1-209ENST00000588915 SDF4Q9BRK5 362 aa16■□□□□ 0.15
VMP1-209ENST00000588915 AGO3Q9H9G7 860 aaKnown RBP16■□□□□ 0.15
VMP1-209ENST00000588915 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
VMP1-209ENST00000588915 PLAGL2Q9UPG8 496 aa16■□□□□ 0.15
VMP1-209ENST00000588915 TRPV2Q9Y5S1 764 aa16■□□□□ 0.15
VMP1-209ENST00000588915 IGSF9BQ9UPX0 1349 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 hCG_1984214I3L0E3 225 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 ATG7O95352 703 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 RXRAP19793 462 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 CD52P31358 61 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 STAT5BP51692 787 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 IGBP1P78318 339 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 PPP1R18Q6NYC8 613 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 RTN4RL1Q86UN2 441 aaPredicted RBP15.99■□□□□ 0.15
VMP1-209ENST00000588915 ZNF713Q8N859 430 aaPredicted RBP15.99■□□□□ 0.15
VMP1-209ENST00000588915 CELF4Q9BZC1 486 aaKnown RBP15.99■□□□□ 0.15
VMP1-209ENST00000588915 GLT8D2Q9H1C3 349 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 RIC8AQ9NPQ8 531 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
VMP1-209ENST00000588915 PADI3Q9ULW8 664 aa15.99■□□□□ 0.15
VMP1-209ENST00000588915 MBTPS2O43462 519 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 ACTR2P61160 394 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 ADAM15Q13444 863 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 SMAD4Q13485 552 aaKnown RBP15.98■□□□□ 0.15
VMP1-209ENST00000588915 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms