RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 MEIS1O00470 390 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 GNAT1P11488 350 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 ACTR2P61160 394 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 PLA2G4DQ86XP0 818 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 REXO1Q8N1G1 1221 aaKnown RBP13.15□□□□□ -0.3
RFX1-204ENST00000588885 LMBR1Q8WVP7 490 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 ZBTB10Q96DT7 871 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 ZNF274Q96GC6 653 aaPredicted RBP13.15□□□□□ -0.3
RFX1-204ENST00000588885 PCYT2Q99447 389 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
RFX1-204ENST00000588885 OSBPL7Q9BZF2 842 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 NID2Q14112 1375 aa13.15□□□□□ -0.3
RFX1-204ENST00000588885 CXCL10P02778 98 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 IGFBP4P22692 258 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 GNA11P29992 359 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 HOXC8P31273 242 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 KCNJ6P48051 423 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 NLRP5P59047 1200 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 RBL2Q08999 1139 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 FAM117BQ6P1L5 589 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 RUFY4Q6ZNE9 571 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 COL25A1Q9BXS0 654 aaPredicted RBP13.14□□□□□ -0.31
RFX1-204ENST00000588885 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 AZI2Q9H6S1 392 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 ERAP1Q9NZ08 941 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 PCDHA11Q9Y5I1 949 aa13.14□□□□□ -0.31
RFX1-204ENST00000588885 DOCK5Q9H7D0 1870 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 CCNE2O96020 404 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 CA3P07451 260 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 NEK4P51957 841 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 WDR5P61964 334 aaKnown RBP13.13□□□□□ -0.31
RFX1-204ENST00000588885 DEFB103AP81534 67 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 IKBKEQ14164 716 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 GRIK4Q16099 956 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 PRR16Q569H4 304 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 PPP2R2DQ66LE6 453 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 CNKSR3Q6P9H4 555 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 HERC6Q8IVU3 1022 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 CCDC148Q8NFR7 591 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 DBF4BQ8NFT6 615 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 ZBED2Q9BTP6 218 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
RFX1-204ENST00000588885 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 RFXAPO00287 272 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 BACH1O14867 736 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 LGR5O75473 907 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 ARHGEF15O94989 841 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 PARNO95453 639 aaKnown RBP13.12□□□□□ -0.31
RFX1-204ENST00000588885 CYP3A4P08684 503 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 INSRRP14616 1297 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 STAT5BP51692 787 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 ADAM17P78536 824 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 SCRN1Q12765 414 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
RFX1-204ENST00000588885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
RFX1-204ENST00000588885 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
RFX1-204ENST00000588885 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 PHOSPHO2Q8TCD6 241 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 TRAPPC12Q8WVT3 735 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 CRYGNQ8WXF5 182 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 SLC9A7Q96T83 725 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
RFX1-204ENST00000588885 NFASCO94856 1347 aa13.12□□□□□ -0.31
RFX1-204ENST00000588885 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
RFX1-204ENST00000588885 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
RFX1-204ENST00000588885 TLL1O43897 1013 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 ST18O60284 1047 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 DEXIO95424 95 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 CHRNA1P02708 482 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 AK2P54819 239 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 ADGRE1Q14246 886 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
RFX1-204ENST00000588885 MARCH8Q5T0T0 291 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 LCE2DQ5TA82 110 aaPredicted RBP13.11□□□□□ -0.31
RFX1-204ENST00000588885 SWSAP1Q6NVH7 229 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 MICALL1Q8N3F8 863 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 NECAB1Q8N987 351 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 TET1Q8NFU7 2136 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 DNAJB3Q8WWF6 145 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 SYMPKQ92797 1274 aaKnown RBP13.11□□□□□ -0.31
RFX1-204ENST00000588885 GJA10Q969M2 543 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 SNX21Q969T3 373 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 FAM49AQ9H0Q0 323 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms