RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 GPR45Q9Y5Y3 372 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 NPHP1O15259 732 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 AGXTP21549 392 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 RPL10P27635 214 aaKnown RBP9.58□□□□□ -0.88
VMP1-208ENST00000588617 ADKP55263 362 aaKnown RBP9.58□□□□□ -0.88
VMP1-208ENST00000588617 GJA9P57773 515 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 TMEM132BQ14DG7 1078 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 NKPD1Q17RQ9 610 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 PLA2G4EQ3MJ16 856 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 HABP4Q5JVS0 413 aaKnown RBP9.58□□□□□ -0.88
VMP1-208ENST00000588617 HLA-DQA1Q5Y7H0 255 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 ERAP2Q6P179 960 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 SRGAP1Q7Z6B7 1085 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 TICAM2Q86XR7 235 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 TMEM52Q8NDY8 209 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 SH3RF2Q8TEC5 729 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 RTF1Q92541 710 aaKnown RBP9.58□□□□□ -0.88
VMP1-208ENST00000588617 HPS3Q969F9 1004 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 HSPA12BQ96MM6 686 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 ACO2Q99798 780 aaKnown RBP9.58□□□□□ -0.88
VMP1-208ENST00000588617 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 NLRC4Q9NPP4 1024 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 KLHL11Q9NVR0 708 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 SRPK3Q9UPE1 567 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 B3GALT1Q9Y5Z6 326 aa9.58□□□□□ -0.88
VMP1-208ENST00000588617 TMEM82A0PJX8 343 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 FAM170BA6NMN3 283 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 A6NNZ2 444 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 C22orf46C9J442 243 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 TPP1O14773 563 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 DGKIO75912 1065 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 FGAP02671 866 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 POU2F2P09086 479 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 OSMP13725 252 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 C5AR1P21730 350 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 ENPP1P22413 925 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 TRAPPC10P48553 1259 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 AK2P54819 239 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 MBTPS1Q14703 1052 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 LLGL1Q15334 1064 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 GAB4Q2WGN9 574 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 FIGNQ5HY92 759 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 ATAT1Q5SQI0 421 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 ZFYVE27Q5T4F4 411 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 ANO1Q5XXA6 986 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 CC2D1AQ6P1N0 951 aaPredicted RBP9.57□□□□□ -0.88
VMP1-208ENST00000588617 LILRA6Q6PI73 481 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 C1orf228Q6PIY5 440 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 ZNF765Q7L2R6 523 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 WAPLQ7Z5K2 1190 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 SRLQ86TD4 932 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 FAM186BQ8IYM0 893 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 GRAMD1CQ8IYS0 662 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 FAM43AQ8N2R8 423 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 BEND7Q8N7W2 519 aaPredicted RBP9.57□□□□□ -0.88
VMP1-208ENST00000588617 ZBTB34Q8NCN2 500 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 MYRIPQ8NFW9 859 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 PIP4K2CQ8TBX8 421 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 SSH1Q8WYL5 1049 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 DLG3Q92796 817 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 ZNF496Q96IT1 587 aaPredicted RBP9.57□□□□□ -0.88
VMP1-208ENST00000588617 FAM193BQ96PV7 902 aaPredicted RBP9.57□□□□□ -0.88
VMP1-208ENST00000588617 SLC2A13Q96QE2 648 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 MAP3K14Q99558 947 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 GTPBP4Q9BZE4 634 aaKnown RBP9.57□□□□□ -0.88
VMP1-208ENST00000588617 QRSL1Q9H0R6 528 aaKnown RBP9.57□□□□□ -0.88
VMP1-208ENST00000588617 ERVK13-1Q9NX77 482 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 DSEQ9UL01 958 aa9.57□□□□□ -0.88
VMP1-208ENST00000588617 CLASP2O75122 1294 aaKnown RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 CYP27A1Q02318 531 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 CHAF1AQ13111 956 aaPredicted RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 ADGRE1Q14246 886 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 FSCN1Q16658 493 aaKnown RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 CT83Q5H943 113 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 CREG2Q8IUH2 290 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 IFNL2Q8IZJ0 200 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 NLGN4XQ8N0W4 816 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 DIS3LQ8TF46 1054 aaKnown RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 NAP1L4Q99733 375 aaKnown RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 MYD88Q99836 296 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 NAA15Q9BXJ9 866 aaKnown RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 ANO3Q9BYT9 981 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 CD244Q9BZW8 370 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 ZNF277Q9NRM2 450 aaPredicted RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 KCNH7Q9NS40 1196 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 ATP23Q9Y6H3 246 aa9.56□□□□□ -0.88
VMP1-208ENST00000588617 TTBK1Q5TCY1 1321 aaPredicted RBP9.56□□□□□ -0.88
VMP1-208ENST00000588617 ZBED1O96006 694 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 FUCA1P04066 466 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 MTNR1BP49286 362 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 OXCT1P55809 520 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 KIF23Q02241 960 aaPredicted RBP9.55□□□□□ -0.88
VMP1-208ENST00000588617 THAP5Q7Z6K1 395 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 SHISA5Q8N114 240 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 Q8N1Y9 231 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 FBXL6Q8N531 539 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.55□□□□□ -0.88
VMP1-208ENST00000588617 EDARQ9UNE0 448 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 DMTF1Q9Y222 760 aa9.55□□□□□ -0.88
VMP1-208ENST00000588617 X6R8D5 127 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms