RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 OSBP2Q969R2 916 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 NEIL1Q96FI4 390 aaPredicted RBP5.25□□□□□ -1.57
VPS4B-203ENST00000588323 ADOQ96SZ5 270 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 TINF2Q9BSI4 451 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 ALG1Q9BT22 464 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 MENTQ9BUN1 341 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 CARD11Q9BXL7 1154 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 SLITRK6Q9H5Y7 841 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 IPPKQ9H8X2 491 aa5.25□□□□□ -1.57
VPS4B-203ENST00000588323 OVOL3O00110 214 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 CUTAO60888 179 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 IL18BPO95998 194 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 ZNF888P0CJ79 500 aaPredicted RBP5.24□□□□□ -1.57
VPS4B-203ENST00000588323 POLD1P28340 1107 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 RAC3P60763 192 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 KLF10Q13118 480 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 DPP8Q6V1X1 898 aaPredicted RBP5.24□□□□□ -1.57
VPS4B-203ENST00000588323 CD244Q9BZW8 370 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 SLC39A2Q9NP94 309 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 PTPN22Q9Y2R2 807 aa5.24□□□□□ -1.57
VPS4B-203ENST00000588323 ESYT3A0FGR9 886 aa5.23□□□□□ -1.57
VPS4B-203ENST00000588323 COMTP21964 271 aa5.23□□□□□ -1.57
VPS4B-203ENST00000588323 FOXE3Q13461 319 aa5.23□□□□□ -1.57
VPS4B-203ENST00000588323 RNF207Q6ZRF8 634 aa5.23□□□□□ -1.57
VPS4B-203ENST00000588323 LRRC47Q8N1G4 583 aaKnown RBP5.23□□□□□ -1.57
VPS4B-203ENST00000588323 ST13P5Q8NFI4 369 aaPredicted RBP5.23□□□□□ -1.57
VPS4B-203ENST00000588323 ARHGAP28Q9P2N2 729 aa5.23□□□□□ -1.57
VPS4B-203ENST00000588323 KLF4O43474 513 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 DBPQ10586 325 aaPredicted RBP5.22□□□□□ -1.57
VPS4B-203ENST00000588323 TOP3AQ13472 1001 aaPredicted RBP5.22□□□□□ -1.57
VPS4B-203ENST00000588323 NRN1LQ496H8 165 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 ZMAT1Q5H9K5 638 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 YOD1Q5VVQ6 348 aaPredicted RBP5.22□□□□□ -1.57
VPS4B-203ENST00000588323 BTBD8Q5XKL5 378 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 FUKQ8N0W3 1084 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 NLGN4XQ8N0W4 816 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 RIC8BQ9NVN3 520 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 ING1Q9UK53 422 aaPredicted RBP5.22□□□□□ -1.57
VPS4B-203ENST00000588323 OAZ3Q9UMX2 235 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 ASXL2Q76L83 1435 aa5.22□□□□□ -1.57
VPS4B-203ENST00000588323 NPIPB8E9PQR5 432 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 PTPN1P18031 435 aaKnown RBP5.21□□□□□ -1.58
VPS4B-203ENST00000588323 CR2P20023 1033 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 RRADP55042 308 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 RNF151Q2KHN1 245 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 WDR72Q3MJ13 1102 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 USP39Q53GS9 565 aaKnown RBP5.21□□□□□ -1.58
VPS4B-203ENST00000588323 AGBL4Q5VU57 503 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 EP400NLQ6ZTU2 488 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 SH3RF2Q8TEC5 729 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 EDAQ92838 391 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 SCYL1Q96KG9 808 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 CSRNP2Q9H175 543 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 SRPK3Q9UPE1 567 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 TRAF6Q9Y4K3 522 aa5.21□□□□□ -1.58
VPS4B-203ENST00000588323 TCRBV5S4A2TA0A5A2 114 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 CDC14BO60729 498 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 RAD17O75943 681 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 ACO1P21399 889 aaKnown RBP5.2□□□□□ -1.58
VPS4B-203ENST00000588323 ETV4P43268 484 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 PAK1Q13153 545 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 FHL2Q14192 279 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 GPR19Q15760 415 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 CRB2Q5IJ48 1285 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 MIIPQ5JXC2 388 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 MTDHQ86UE4 582 aaKnown RBP5.2□□□□□ -1.58
VPS4B-203ENST00000588323 CATSPERZQ9NTU4 200 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 NR2E1Q9Y466 385 aa5.2□□□□□ -1.58
VPS4B-203ENST00000588323 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.19□□□□□ -1.58
VPS4B-203ENST00000588323 FAM90A27PA6NNH2 459 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 AQP7O14520 342 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 ABHD18Q0P651 414 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 ARHGAP36Q6ZRI8 547 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 POLNQ7Z5Q5 900 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 SLC43A3Q8NBI5 491 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 ZNF669Q96BR6 464 aaPredicted RBP5.19□□□□□ -1.58
VPS4B-203ENST00000588323 ZNF503Q96F45 646 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 OR14A2Q96R54 314 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 DPYSL5Q9BPU6 564 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 TRIM55Q9BYV6 548 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 C12orf65Q9H3J6 166 aaKnown RBP5.19□□□□□ -1.58
VPS4B-203ENST00000588323 FBXO10Q9UK96 956 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 ATP23Q9Y6H3 246 aa5.19□□□□□ -1.58
VPS4B-203ENST00000588323 ZNF202O95125 648 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 HMGCRP04035 888 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 PTGS1P23219 599 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 GJA4P35212 333 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 TGFB2P61812 414 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 PTH1RQ03431 593 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 RAB33AQ14088 237 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 NOLC1Q14978 699 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS4B-203ENST00000588323 MAMDC2Q7Z304 686 aaPredicted RBP5.18□□□□□ -1.58
VPS4B-203ENST00000588323 PTPRN2Q92932 1015 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 EXTL1Q92935 676 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 FBXW5Q969U6 566 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 FAM89AQ96GI7 184 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 GMLQ99445 158 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 CDC6Q99741 560 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 SPATA9Q9BWV2 254 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 INCENPQ9NQS7 918 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms