RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
NCLN-203ENST00000587740 SLC35G1Q2M3R5 365 aa17.99■□□□□ 0.47
NCLN-203ENST00000587740 CTC1Q2NKJ3 1217 aa17.99■□□□□ 0.47
NCLN-203ENST00000587740 HFE2Q6ZVN8 426 aa17.99■□□□□ 0.47
NCLN-203ENST00000587740 RPAINQ86UA6 219 aa17.99■□□□□ 0.47
NCLN-203ENST00000587740 HOMER1Q86YM7 354 aa17.99■□□□□ 0.47
NCLN-203ENST00000587740 SRBD1Q8N5C6 995 aaKnown RBP17.99■□□□□ 0.47
NCLN-203ENST00000587740 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
NCLN-203ENST00000587740 IFIH1Q9BYX4 1025 aaKnown RBP17.99■□□□□ 0.47
NCLN-203ENST00000587740 ZBTB5O15062 677 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 CYTH3O43739 400 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 PLEKHA8P1O95397 391 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 TGFB3P10600 412 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 HYAL1Q12794 435 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 CMTR1Q8N1G2 835 aaKnown RBP17.98■□□□□ 0.47
NCLN-203ENST00000587740 RRP36Q96EU6 259 aaKnown RBP17.98■□□□□ 0.47
NCLN-203ENST00000587740 ZNF274Q96GC6 653 aaPredicted RBP17.98■□□□□ 0.47
NCLN-203ENST00000587740 PIGSQ96S52 555 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 KCNH6Q9H252 994 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 MLXIPQ9HAP2 919 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 SETD4Q9NVD3 440 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
NCLN-203ENST00000587740 TELO2Q9Y4R8 837 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 DOCK5Q9H7D0 1870 aa17.98■□□□□ 0.47
NCLN-203ENST00000587740 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 C5orf67F2Z3F1 127 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 GRM6O15303 877 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 CAND2O75155 1236 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
NCLN-203ENST00000587740 ADAM17P78536 824 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 TRAF1Q13077 416 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 CLUL1Q15846 466 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 CCDC82Q8N4S0 544 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 PIBF1Q8WXW3 757 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 LARP6Q9BRS8 491 aaKnown RBP17.97■□□□□ 0.47
NCLN-203ENST00000587740 SEC63Q9UGP8 760 aaKnown RBP17.97■□□□□ 0.47
NCLN-203ENST00000587740 FAM50BQ9Y247 325 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 PCDHA1Q9Y5I3 950 aa17.97■□□□□ 0.47
NCLN-203ENST00000587740 NID2Q14112 1375 aa17.96■□□□□ 0.47
NCLN-203ENST00000587740 CDC27P30260 824 aa17.96■□□□□ 0.47
NCLN-203ENST00000587740 CTNNB1P35222 781 aa17.96■□□□□ 0.47
NCLN-203ENST00000587740 GTF2F1P35269 517 aaKnown RBP eCLIP17.96■□□□□ 0.475e-11■■■■□ 24.4
NCLN-203ENST00000587740 ADD1P35611 737 aaKnown RBP17.96■□□□□ 0.47
NCLN-203ENST00000587740 AK2P54819 239 aa17.96■□□□□ 0.47
NCLN-203ENST00000587740 SEMA3FQ13275 785 aa17.96■□□□□ 0.47
NCLN-203ENST00000587740 SMAD2Q15796 467 aaKnown RBP17.96■□□□□ 0.47
NCLN-203ENST00000587740 TRIM50Q86XT4 487 aa17.96■□□□□ 0.47
NCLN-203ENST00000587740 RC3H2Q9HBD1 1191 aaKnown RBP17.96■□□□□ 0.47
NCLN-203ENST00000587740 MBTPS2O43462 519 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 CCND2P30279 289 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 BMPR1AP36894 532 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
NCLN-203ENST00000587740 MRPS9P82933 396 aaKnown RBP17.95■□□□□ 0.46
NCLN-203ENST00000587740 FAM26DQ5JW98 314 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 FIBCD1Q8N539 461 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 SAMD3Q8N6K7 520 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 TBC1D32Q96NH3 1257 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 PHOX2BQ99453 314 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 KIF2CQ99661 725 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 FAM217BQ9NTX9 383 aaPredicted RBP17.95■□□□□ 0.46
NCLN-203ENST00000587740 MUTYHQ9UIF7 546 aa17.95■□□□□ 0.46
NCLN-203ENST00000587740 TTC3P53804 2025 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 KAT6AQ92794 2004 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 NCK2O43639 380 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 TBX10O75333 385 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 CHRNA1P02708 482 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 RB1P06400 928 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 STK3Q13188 491 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 CAMK1Q14012 370 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 HERC4Q5GLZ8 1057 aaPredicted RBP17.94■□□□□ 0.46
NCLN-203ENST00000587740 APBB2Q92870 758 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 GPR20Q99678 358 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 CNTNAP5Q8WYK1 1306 aa17.94■□□□□ 0.46
NCLN-203ENST00000587740 ZDBF2Q9HCK1 2354 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 GCOM1H8Y6P7 765 aaPredicted RBP17.93■□□□□ 0.46
NCLN-203ENST00000587740 LINC01565O15544 149 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 POLR2MP0CAP2 368 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 ICAM3P32942 547 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 RABEP1Q15276 862 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 METTL7BQ6UX53 244 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 CYFIP1Q7L576 1253 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 RNF135Q8IUD6 432 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 LMBR1Q8WVP7 490 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 CLP1Q92989 425 aaKnown RBP17.93■□□□□ 0.46
NCLN-203ENST00000587740 INPP4AQ96PE3 977 aaPredicted RBP17.93■□□□□ 0.46
NCLN-203ENST00000587740 LMAN2LQ9H0V9 348 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 SLKQ9H2G2 1235 aaPredicted RBP17.93■□□□□ 0.46
NCLN-203ENST00000587740 TPCN1Q9ULQ1 816 aa17.93■□□□□ 0.46
NCLN-203ENST00000587740 USP34Q70CQ2 3546 aa17.92■□□□□ 0.46
NCLN-203ENST00000587740 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
NCLN-203ENST00000587740 SPATA31C2B4DYI2 1134 aa17.92■□□□□ 0.46
NCLN-203ENST00000587740 NOP56O00567 594 aaKnown RBP17.92■□□□□ 0.46
NCLN-203ENST00000587740 CSPG5O95196 566 aa17.92■□□□□ 0.46
NCLN-203ENST00000587740 GHRP10912 638 aa17.92■□□□□ 0.46
NCLN-203ENST00000587740 GNAT1P11488 350 aa17.92■□□□□ 0.46
NCLN-203ENST00000587740 ARHGAP4P98171 946 aa17.92■□□□□ 0.46
NCLN-203ENST00000587740 CPLX2Q6PUV4 134 aaKnown RBP17.92■□□□□ 0.46
NCLN-203ENST00000587740 RUFY4Q6ZNE9 571 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms