RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 NLRX1Q86UT6 975 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 CHST13Q8NET6 341 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 RDM1Q8NG50 284 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 GPRASP2Q96D09 838 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 ERGIC2Q96RQ1 377 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 ZHX3Q9H4I2 956 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 ZSWIM4Q9H7M6 989 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 TRMT1Q9NXH9 659 aaKnown RBP15.71■□□□□ 0.11
LIG3-205ENST00000585941 ODF2LQ9ULJ1 636 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 RIPK3Q9Y572 518 aa15.71■□□□□ 0.11
LIG3-205ENST00000585941 ADM5C9JUS6 153 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 TRAF5O00463 557 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 SFNP31947 248 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 JAK3P52333 1124 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 KRT76Q01546 638 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 GOLGA8FQ08AF8 430 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 GOLGA8DPQ0D2H9 430 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 VWA3BQ502W6 1294 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 FIGNQ5HY92 759 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 C1orf186Q6ZWK4 172 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 EPM2AIP1Q7L775 607 aaPredicted RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 VSIG10LQ86VR7 867 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 TMTC1Q8IUR5 882 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 ANKRD13AQ8IZ07 590 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 PROCA1Q8NCQ7 364 aaPredicted RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 CPLX3Q8WVH0 158 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 SCFD1Q8WVM8 642 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 CDHR1Q96JP9 859 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 LXNQ9BS40 222 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 SCN4AP35499 1836 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 B4DLN1 442 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 CXCL11O14625 94 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 EIF3DO15371 548 aaKnown RBP eCLIP15.7■□□□□ 0.1
LIG3-205ENST00000585941 FAM13AO94988 1023 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 LYPLA2O95372 231 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 MYCLP12524 364 aaPredicted RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 FXR1P51114 621 aaKnown RBP eCLIP15.7■□□□□ 0.1
LIG3-205ENST00000585941 MARSP56192 900 aaKnown RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 BMT2Q1RMZ1 405 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 TSR1Q2NL82 804 aaKnown RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 MIIPQ5JXC2 388 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 SFR1Q86XK3 245 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 ERO1BQ86YB8 467 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 ZC3H3Q8IXZ2 948 aaKnown RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 PIGOQ8TEQ8 1089 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 RUSC1Q9BVN2 902 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 KCTD10Q9H3F6 313 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 TBC1D7Q9P0N9 293 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 FBXO40Q9UH90 709 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 DBR1Q9UK59 544 aaKnown RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 CAPN11Q9UMQ6 739 aa15.7■□□□□ 0.1
LIG3-205ENST00000585941 LUC7L2Q9Y383 392 aaKnown RBP15.7■□□□□ 0.1
LIG3-205ENST00000585941 A0A0G2JMZ2 1700 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 UBE4BO95155 1302 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 PDXKO00764 312 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 NR3C2P08235 984 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 GUCY2CP25092 1073 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 KRT9P35527 623 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
LIG3-205ENST00000585941 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
LIG3-205ENST00000585941 RAD51AP2Q09MP3 1159 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 ITGB3BPQ13352 177 aaPredicted RBP15.69■□□□□ 0.1
LIG3-205ENST00000585941 KNOP1Q1ED39 458 aaKnown RBP15.69■□□□□ 0.1
LIG3-205ENST00000585941 CYP26C1Q6V0L0 522 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 GLIS3Q8NEA6 775 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 MYRIPQ8NFW9 859 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 OR8K1Q8NGG5 319 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 KIF18AQ8NI77 898 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 NDST4Q9H3R1 872 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 PARVGQ9HBI0 331 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 ABHD10Q9NUJ1 306 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 CYP39A1Q9NYL5 469 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 TRAF3IP3Q9Y228 551 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 PPP2R2CQ9Y2T4 447 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 MYH11P35749 1972 aa15.69■□□□□ 0.1
LIG3-205ENST00000585941 A0A1W2PQJ5 194 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 CETN3O15182 167 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 CALUO43852 315 aaPredicted RBP15.68■□□□□ 0.1
LIG3-205ENST00000585941 EPHX2P34913 555 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 ZNF131P52739 623 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 CDCA5Q96FF9 252 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 ZFP91Q96JP5 570 aaPredicted RBP15.68■□□□□ 0.1
LIG3-205ENST00000585941 INPP4AQ96PE3 977 aaPredicted RBP15.68■□□□□ 0.1
LIG3-205ENST00000585941 IWS1Q96ST2 819 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 TIPINQ9BVW5 301 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 MRPL44Q9H9J2 332 aaKnown RBP15.68■□□□□ 0.1
LIG3-205ENST00000585941 FAM184BQ9ULE4 1060 aa15.68■□□□□ 0.1
LIG3-205ENST00000585941 PFASO15067 1338 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 A0A0G2JLL6 359 aaPredicted RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 TESPA1A2RU30 521 aaPredicted RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 WDR64B1ANS9 1081 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 DKC1O60832 514 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIG3-205ENST00000585941 CCDC175P0C221 793 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 TRIM21P19474 475 aaKnown RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 RPL13P26373 211 aaKnown RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 PPP2R3AQ06190 1150 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 SYCP1Q15431 976 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms