RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 BEX3Q00994 111 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 SNW1Q13573 536 aaKnown RBP14.19□□□□□ -0.14
VMP1-202ENST00000585847 IL17AQ16552 155 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 HAUS3Q68CZ6 603 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 METTL7BQ6UX53 244 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 UBE2Q1Q7Z7E8 422 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 IQUBQ8NA54 791 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 SDF4Q9BRK5 362 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 ZNF577Q9BSK1 485 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 XPNPEP3Q9NQH7 507 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 KDM3AQ9Y4C1 1321 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 GSTTP1A0A1W2PQM5 241 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 A6NJR5 290 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 ZNF202O95125 648 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 MMP3P08254 477 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 CAPN2P17655 700 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 CST5P28325 142 aaPredicted RBP14.18□□□□□ -0.14
VMP1-202ENST00000585847 UBA7P41226 1012 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 NDUFA8P51970 172 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 SPIRE1Q08AE8 756 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 NEDD9Q14511 834 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 LRRC41Q15345 812 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 DHX37Q8IY37 1157 aaKnown RBP14.18□□□□□ -0.14
VMP1-202ENST00000585847 IGSF22Q8N9C0 903 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 ERMNQ8TAM6 284 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 AFG1LQ8WV93 481 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 GPR20Q99678 358 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 LRRC27Q9C0I9 530 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 CSRNP2Q9H175 543 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 VAV3Q9UKW4 847 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 SZT2Q5T011 3432 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
VMP1-202ENST00000585847 VWA3AA6NCI4 1184 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 GOLGA6L3A6NEY3 463 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 DDX39AO00148 427 aaKnown RBP14.17□□□□□ -0.14
VMP1-202ENST00000585847 MARCH6O60337 910 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 ATG7O95352 703 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 SLFN14P0C7P3 912 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 MUTP22033 750 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 LAMC2Q13753 1193 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 CEP57L1Q8IYX8 460 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 CNNM3Q8NE01 707 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 PPTC7Q8NI37 304 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 PCYT2Q99447 389 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 RIT2Q99578 217 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 NT5C3AQ9H0P0 336 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 UNC45AQ9H3U1 944 aa14.17□□□□□ -0.14
VMP1-202ENST00000585847 RANBP2P49792 3224 aaKnown RBP14.17□□□□□ -0.14
VMP1-202ENST00000585847 A0A1B0GVL5 298 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 A0A1W2PPC1 479 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 EML1O00423 815 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 SMC2O95347 1197 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 MRE11P49959 708 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 KCNA10Q16322 511 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 CT47A1Q5JQC4 288 aaPredicted RBP14.16□□□□□ -0.14
VMP1-202ENST00000585847 LRCH2Q5VUJ6 765 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 KRT79Q5XKE5 535 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 SASS6Q6UVJ0 657 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 KRBA2Q6ZNG9 492 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 TRIML1Q8N9V2 468 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 NEK9Q8TD19 979 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 CALML4Q96GE6 196 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 SPATA33Q96N06 139 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 NAT10Q9H0A0 1025 aaKnown RBP14.16□□□□□ -0.14
VMP1-202ENST00000585847 AP5M1Q9H0R1 490 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 TSPY26PQ9H489 355 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 GOLPH3LQ9H4A5 285 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 MLXIPQ9HAP2 919 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 JPH1Q9HDC5 661 aaPredicted RBP14.16□□□□□ -0.14
VMP1-202ENST00000585847 TBC1D22BQ9NU19 505 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 SLC9A2Q9UBY0 812 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 STK17AQ9UEE5 414 aa14.16□□□□□ -0.14
VMP1-202ENST00000585847 MYH9P35579 1960 aaKnown RBP14.16□□□□□ -0.14
VMP1-202ENST00000585847 IGKV6D-21A0A0A0MT36 114 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 SYCE3A1L190 88 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 FSD2A1L4K1 749 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 LGR5O75473 907 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 C6orf222P0C671 652 aaPredicted RBP14.15□□□□□ -0.14
VMP1-202ENST00000585847 ACTR2P61160 394 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 SP4Q02446 784 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 GRIN1Q05586 938 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 PPP2R5CQ13362 524 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 STX1AQ16623 288 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 FSCN1Q16658 493 aaKnown RBP14.15□□□□□ -0.14
VMP1-202ENST00000585847 ABHD15Q6UXT9 468 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 GIMAP8Q8ND71 665 aaPredicted RBP14.15□□□□□ -0.14
VMP1-202ENST00000585847 SLC17A8Q8NDX2 589 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 DIS3LQ8TF46 1054 aaKnown RBP14.15□□□□□ -0.14
VMP1-202ENST00000585847 SYMPKQ92797 1274 aaKnown RBP14.15□□□□□ -0.14
VMP1-202ENST00000585847 KAT2BQ92831 832 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 CLIC6Q96NY7 704 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 C16orf70Q9BSU1 422 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 TEKT3Q9BXF9 490 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 GZF1Q9H116 711 aaPredicted RBP14.15□□□□□ -0.14
VMP1-202ENST00000585847 DISC1Q9NRI5 854 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 LRWD1Q9UFC0 647 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 TCEAL9Q9UHQ7 104 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 PCDHA12Q9UN75 941 aa14.15□□□□□ -0.14
VMP1-202ENST00000585847 GAS7O60861 476 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 TXKP42681 527 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms