RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 MXD3Q9BW11 206 aa3.5□□□□□ -1.85
CCDC178-213ENST00000583930 MKNK2Q9HBH9 465 aa3.5□□□□□ -1.85
CCDC178-213ENST00000583930 GJD2Q9UKL4 321 aa3.5□□□□□ -1.85
CCDC178-213ENST00000583930 WDR33Q9C0J8 1336 aaKnown RBP3.5□□□□□ -1.85
CCDC178-213ENST00000583930 COL1A2P08123 1366 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 NLRC5Q86WI3 1866 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 A0A1W2PRG0 241 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 ADM5C9JUS6 153 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 UPP2O95045 317 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 VCAM1P19320 739 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 NFKB1P19838 968 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 PDIA3P30101 505 aaKnown RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 GRIA4P48058 902 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 POU5F1Q01860 360 aaKnown RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 BMS1Q14692 1282 aaKnown RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CCDC144BQ3MJ40 725 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CRACR2BQ8N4Y2 399 aaPredicted RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 FAM133AQ8N9E0 248 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 PRPF38AQ8NAV1 312 aaKnown RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 EDC3Q96F86 508 aaKnown RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 ABHD17AQ96GS6 310 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CNTNAP3BQ96NU0 1288 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 SEC62Q99442 399 aaKnown RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 SLC30A3Q99726 388 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 SLF1Q9BQI6 1058 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CNTNAP3Q9BZ76 1288 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 FOXP1Q9H334 677 aaPredicted RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 BARHL2Q9NY43 387 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 UBP1Q9NZI7 540 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 LIMCH1Q9UPQ0 1083 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CYP46A1Q9Y6A2 500 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 ASTN2O75129 1339 aaPredicted RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 ELP1O95163 1332 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 TNKSO95271 1327 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 DENND4AQ7Z401 1863 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 VWA5AO00534 786 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 ZBTB5O15062 677 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CTDNEP1O95476 244 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 GCFC2P16383 781 aaKnown RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 YY1P25490 414 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 USP11P51784 963 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 TBC1D10BQ4KMP7 808 aaPredicted RBP3.49□□□□□ -1.85
CCDC178-213ENST00000583930 IFFO2Q5TF58 517 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 OTUD7BQ6GQQ9 843 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 KANK3Q6NY19 840 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 MCF2L2Q86YR7 1114 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 ZNF654Q8IZM8 581 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 C3orf58Q8NDZ4 430 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 GLIS3Q8NEA6 775 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 AFAP1L1Q8TED9 768 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 SNX29Q8TEQ0 813 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 BHMTQ93088 406 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CEP95Q96GE4 821 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CABP5Q9NP86 173 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 MCM9Q9NXL9 1143 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 PCDHAC2Q9Y5I4 1007 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 CSADQ9Y600 493 aa3.49□□□□□ -1.85
CCDC178-213ENST00000583930 STXBP3O00186 592 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 PRC1O43663 620 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 DEXIO95424 95 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 NDUFB10O96000 172 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 COL6A1P12109 1028 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 EEF2P13639 858 aaKnown RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 SREBF1P36956 1147 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 ICA1Q05084 483 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 COG2Q14746 738 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 ARHGEF6Q15052 776 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 CCDC85BQ15834 202 aaPredicted RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 CTC1Q2NKJ3 1217 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 KIAA1755Q5JYT7 1200 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 RASIP1Q5U651 963 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 PCNX4Q63HM2 1172 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 KIAA1211Q6ZU35 1233 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 HS2ST1Q7LGA3 356 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 NSUN7Q8NE18 718 aaKnown RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 BICD2Q8TD16 824 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 ASAP3Q8TDY4 903 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 CCDC12Q8WUD4 166 aaPredicted RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 OPTNQ96CV9 577 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 PTPN18Q99952 460 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 ZKSCAN3Q9BRR0 538 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 GLIS2Q9BZE0 524 aaPredicted RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 VTA1Q9NP79 307 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 ADAMTS1Q9UHI8 967 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 KPNA6O60684 536 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 BMP15O95972 392 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 C1RP00736 705 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 TGFB3P10600 412 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 BMP3P12645 472 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 TDO2P48775 406 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 ATP11AP98196 1134 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 CHAF1AQ13111 956 aaPredicted RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 TAF1CQ15572 869 aaPredicted RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 SYDE2Q5VT97 1194 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 BLOC1S2Q6QNY1 142 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 CWC27Q6UX04 472 aaKnown RBP3.48□□□□□ -1.85
CCDC178-213ENST00000583930 BRAPQ7Z569 592 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 MAPKAPK5Q8IW41 473 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 FANCBQ8NB91 859 aa3.48□□□□□ -1.85
CCDC178-213ENST00000583930 FBXO27Q8NI29 283 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms