RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 SMIM10L2AP0DMW4 78 aa27.56■■■□□ 2
MIR3960-201ENST00000583311 SMIM10L2BP0DMW5 78 aa27.56■■■□□ 2
MIR3960-201ENST00000583311 MARK3P27448 753 aa27.56■■■□□ 2
MIR3960-201ENST00000583311 TOB1P50616 345 aaPredicted RBP27.56■■■□□ 2
MIR3960-201ENST00000583311 PDXDC2PQ6P474 469 aa27.56■■■□□ 2
MIR3960-201ENST00000583311 FERMT3Q86UX7 667 aa27.56■■■□□ 2
MIR3960-201ENST00000583311 CCDC60Q8IWA6 550 aaPredicted RBP27.56■■■□□ 2
MIR3960-201ENST00000583311 ZSCAN16Q9H4T2 348 aaPredicted RBP27.56■■■□□ 2
MIR3960-201ENST00000583311 TTC12Q9H892 705 aaPredicted RBP27.56■■■□□ 2
MIR3960-201ENST00000583311 PDLIM7Q9NR12 457 aa27.56■■■□□ 2
MIR3960-201ENST00000583311 C17orf102A2RUQ5 167 aa27.55■■■□□ 2
MIR3960-201ENST00000583311 TXKP42681 527 aa27.55■■■□□ 2
MIR3960-201ENST00000583311 TRPV6Q9H1D0 765 aa27.55■■■□□ 2
MIR3960-201ENST00000583311 TMEM60Q9H2L4 133 aa27.55■■■□□ 2
MIR3960-201ENST00000583311 RNPEPQ9H4A4 650 aa27.55■■■□□ 2
MIR3960-201ENST00000583311 GABBR1Q9UBS5 961 aa27.55■■■□□ 2
MIR3960-201ENST00000583311 PCDHB6Q9Y5E3 794 aa27.55■■■□□ 2
MIR3960-201ENST00000583311 MAFBQ9Y5Q3 323 aaPredicted RBP27.55■■■□□ 2
MIR3960-201ENST00000583311 PTGISQ16647 500 aa27.54■■■□□ 2
MIR3960-201ENST00000583311 GDF6Q6KF10 455 aaPredicted RBP27.54■■■□□ 2
MIR3960-201ENST00000583311 CKAP2LQ8IYA6 745 aa27.54■■■□□ 2
MIR3960-201ENST00000583311 PPP1R13LQ8WUF5 828 aa27.54■■■□□ 2
MIR3960-201ENST00000583311 NRCAMQ92823 1304 aa27.54■■■□□ 2
MIR3960-201ENST00000583311 ATP6V0A1Q93050 837 aa27.54■■■□□ 2
MIR3960-201ENST00000583311 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.54■■■□□ 2
MIR3960-201ENST00000583311 TRMT13Q9NUP7 481 aaKnown RBP27.54■■■□□ 2
MIR3960-201ENST00000583311 TRPC6Q9Y210 931 aa27.54■■■□□ 2
MIR3960-201ENST00000583311 POTEB3A0JP26 581 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 KIAA0355O15063 1070 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 DKC1O60832 514 aaKnown RBP eCLIP27.53■■■□□ 2
MIR3960-201ENST00000583311 PPFIA1Q13136 1202 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 NBR1Q14596 966 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 TMEM266Q2M3C6 531 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 NCAPH2Q6IBW4 605 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 POTEBQ6S5H4 581 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 FAM167AQ96KS9 214 aa27.53■■■□□ 2
MIR3960-201ENST00000583311 IGSF9BQ9UPX0 1349 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 RESTQ13127 1097 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 PTGDRQ13258 359 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 PLCB4Q15147 1175 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 EPHA7Q15375 998 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 CCDC155Q8N6L0 562 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 ATP8B4Q8TF62 1192 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 TBX21Q9UL17 535 aa27.52■■■□□ 2
MIR3960-201ENST00000583311 ZMYND8Q9ULU4 1186 aaPredicted RBP27.52■■■□□ 2
MIR3960-201ENST00000583311 RRN3P2A6NIE6 340 aa27.51■■□□□ 1.99
MIR3960-201ENST00000583311 HBP1O60381 514 aa27.51■■□□□ 1.99
MIR3960-201ENST00000583311 BMP15O95972 392 aa27.51■■□□□ 1.99
MIR3960-201ENST00000583311 HOXC8P31273 242 aa27.51■■□□□ 1.99
MIR3960-201ENST00000583311 BBXQ8WY36 941 aaPredicted RBP27.51■■□□□ 1.99
MIR3960-201ENST00000583311 RAB34Q9BZG1 259 aa27.51■■□□□ 1.99
MIR3960-201ENST00000583311 CEP131Q9UPN4 1083 aa27.51■■□□□ 1.99
MIR3960-201ENST00000583311 H0YGN5 161 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 EML1O00423 815 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 RAG1P15918 1043 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 SYN1P17600 705 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 SPIRE1Q08AE8 756 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 GRIK4Q16099 956 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 NEK9Q8TD19 979 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 LBHD1Q9BQE6 289 aaPredicted RBP27.5■■□□□ 1.99
MIR3960-201ENST00000583311 NRBP2Q9NSY0 501 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 SETD4Q9NVD3 440 aa27.5■■□□□ 1.99
MIR3960-201ENST00000583311 TRIM43BA6NCK2 446 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 P4HBP07237 508 aaKnown RBP27.49■■□□□ 1.99
MIR3960-201ENST00000583311 PRPHP41219 470 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 PSMC5P62195 406 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 PTK7Q13308 1070 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 BFSP2Q13515 415 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 SH3RF1Q7Z6J0 888 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 C4orf32Q8N8J7 132 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 TRIM43Q96BQ3 446 aaPredicted RBP27.49■■□□□ 1.99
MIR3960-201ENST00000583311 HIPK3Q9H422 1215 aa27.49■■□□□ 1.99
MIR3960-201ENST00000583311 COL1A2P08123 1366 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 TIMP1P01033 207 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 ZSCAN22P10073 491 aaPredicted RBP27.48■■□□□ 1.99
MIR3960-201ENST00000583311 INSRRP14616 1297 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 TECP42680 631 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 QARSP47897 775 aaKnown RBP27.48■■□□□ 1.99
MIR3960-201ENST00000583311 PRKCEQ02156 737 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 ZNF484Q5JVG2 852 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 ERMNQ8TAM6 284 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 CAGE1Q8TC20 777 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 LMBR1Q8WVP7 490 aa27.48■■□□□ 1.99
MIR3960-201ENST00000583311 OATP04181 439 aa27.47■■□□□ 1.99
MIR3960-201ENST00000583311 CYP2C9P11712 490 aa27.47■■□□□ 1.99
MIR3960-201ENST00000583311 ATP4AP20648 1035 aa27.47■■□□□ 1.99
MIR3960-201ENST00000583311 FXR2P51116 673 aaKnown RBP eCLIP27.47■■□□□ 1.99
MIR3960-201ENST00000583311 ATP2C1P98194 919 aaPredicted RBP27.47■■□□□ 1.99
MIR3960-201ENST00000583311 DTHD1Q6ZMT9 781 aa27.47■■□□□ 1.99
MIR3960-201ENST00000583311 STK24Q9Y6E0 443 aa27.47■■□□□ 1.99
MIR3960-201ENST00000583311 MYH9P35579 1960 aaKnown RBP27.46■■□□□ 1.99
MIR3960-201ENST00000583311 PITPNM1O00562 1244 aa27.46■■□□□ 1.99
MIR3960-201ENST00000583311 ANP32AP39687 249 aaKnown RBP27.46■■□□□ 1.99
MIR3960-201ENST00000583311 ADAM17P78536 824 aa27.46■■□□□ 1.99
MIR3960-201ENST00000583311 ZNF200P98182 395 aaPredicted RBP27.46■■□□□ 1.99
MIR3960-201ENST00000583311 PDIA5Q14554 519 aa27.46■■□□□ 1.99
MIR3960-201ENST00000583311 UGCGQ16739 394 aa27.46■■□□□ 1.99
MIR3960-201ENST00000583311 XKR3Q5GH77 459 aa27.46■■□□□ 1.99
MIR3960-201ENST00000583311 PRPF38BQ5VTL8 546 aaKnown RBP27.46■■□□□ 1.99
MIR3960-201ENST00000583311 ARL6IP4Q66PJ3 421 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms