RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 CSF2RAP15509 400 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 XBP1P17861 261 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 TCF7P36402 384 aaPredicted RBP9.19□□□□□ -0.94
KPNB1-213ENST00000583013 USP11P51784 963 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 CHMP4BP1P59074 171 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 SP4Q02446 784 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 PTK7Q13308 1070 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 BFSP2Q13515 415 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 RABEP1Q15276 862 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 SHHQ15465 462 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 C9orf50Q5SZB4 431 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 PSRC1Q6PGN9 363 aaPredicted RBP9.19□□□□□ -0.94
KPNB1-213ENST00000583013 PLA2G4DQ86XP0 818 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 TRIM50Q86XT4 487 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 NSUN7Q8NE18 718 aaKnown RBP9.19□□□□□ -0.94
KPNB1-213ENST00000583013 CAGE1Q8TC20 777 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 LENG9Q96B70 501 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 SDF4Q9BRK5 362 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 UPF2Q9HAU5 1272 aaKnown RBP9.19□□□□□ -0.94
KPNB1-213ENST00000583013 IL23AQ9NPF7 189 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 LIMCH1Q9UPQ0 1083 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 NOD1Q9Y239 953 aa9.19□□□□□ -0.94
KPNB1-213ENST00000583013 CYP3A7-CYP3A51PA0A087WV96 503 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 C17orf102A2RUQ5 167 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 IPO5O00410 1097 aaKnown RBP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 DHX15O43143 795 aaKnown RBP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 LGR5O75473 907 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 ATG7O95352 703 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 PFKMP08237 780 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 SMIM10L2AP0DMW4 78 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 SMIM10L2BP0DMW5 78 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 CYP3A7P24462 503 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 RFC2P35250 354 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 CCL23P55773 120 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 ACTR2P61160 394 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 SCN5AQ14524 2016 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 HIC1Q14526 733 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 NONOQ15233 471 aaKnown RBP eCLIP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 TMEM240Q5SV17 173 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 UTP14CQ5TAP6 766 aaKnown RBP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 MOXD1Q6UVY6 613 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 C16orf59Q7L2K0 433 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 KRT25Q7Z3Z0 450 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 SERINC5Q86VE9 423 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 TBCKQ8TEA7 893 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 AFAP1L1Q8TED9 768 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 DHX38Q92620 1227 aaKnown RBP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 ZSCAN31Q96LW9 406 aaPredicted RBP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.18□□□□□ -0.945e-9■□□□□ 8.6
KPNB1-213ENST00000583013 LLPHQ9BRT6 129 aaKnown RBP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 ZNF577Q9BSK1 485 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 SMARCAD1Q9H4L7 1026 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 SH2B1Q9NRF2 756 aaPredicted RBP9.18□□□□□ -0.94
KPNB1-213ENST00000583013 TBC1D22BQ9NU19 505 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 ERAP1Q9NZ08 941 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 KCNJ14Q9UNX9 436 aa9.18□□□□□ -0.94
KPNB1-213ENST00000583013 NRCAMQ92823 1304 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 IGKV6D-21A0A0A0MT36 114 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 JAK2O60674 1132 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 PARNO95453 639 aaKnown RBP9.17□□□□□ -0.94
KPNB1-213ENST00000583013 CCNE2O96020 404 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 IQCF3P0C7M6 154 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 GNAT1P11488 350 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 CKBP12277 381 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 ADAM17P78536 824 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 E2F4Q16254 413 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 TRIM71Q2Q1W2 868 aaKnown RBP9.17□□□□□ -0.94
KPNB1-213ENST00000583013 Q4G0T1 1027 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 PRR16Q569H4 304 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 PLPPR4Q7Z2D5 763 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 RPUSD2Q8IZ73 545 aaKnown RBP9.17□□□□□ -0.94
KPNB1-213ENST00000583013 RETREG2Q8NC44 543 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 ATP6V0A1Q93050 837 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 VWCEQ96DN2 955 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 SCLYQ96I15 445 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 RNPC3Q96LT9 517 aaKnown RBP9.17□□□□□ -0.94
KPNB1-213ENST00000583013 MBOAT7Q96N66 472 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 PCYT2Q99447 389 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 RNPEPQ9H4A4 650 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 GJB4Q9NTQ9 266 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 TRIP12Q14669 1992 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-213ENST00000583013 WDR81Q562E7 1941 aa9.17□□□□□ -0.94
KPNB1-213ENST00000583013 TRIOBPQ9H2D6 2365 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 CCDC194A0A1B0GVG4 234 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 MSH4O15457 936 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 DTNBO60941 627 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 CAND2O75155 1236 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 MMP1P03956 469 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 ACRP10323 421 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 SELPP16109 830 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 KRT2P35908 639 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 SLC26A2P50443 739 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 SMAD3P84022 425 aaKnown RBP9.16□□□□□ -0.94
KPNB1-213ENST00000583013 ZNF200P98182 395 aaPredicted RBP9.16□□□□□ -0.94
KPNB1-213ENST00000583013 KRT76Q01546 638 aa9.16□□□□□ -0.94
KPNB1-213ENST00000583013 ZNF746Q6NUN9 644 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms