RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 NUCB2P80303 420 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 HYAL1Q12794 435 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PTK7Q13308 1070 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 CBX2Q14781 532 aaPredicted RBP9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 TRAF7Q6Q0C0 670 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ASIC4Q96FT7 647 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PURBQ96QR8 312 aaKnown RBP9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 RIOX1Q9H6W3 641 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 TLR9Q9NR96 1032 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 MAP3K20Q9NYL2 800 aaKnown RBP9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 GTF2IRD1Q9UHL9 959 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 CCPG1Q9ULG6 757 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ISY1Q9ULR0 285 aaKnown RBP9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 RWDD3Q9Y3V2 267 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ATP6V1DQ9Y5K8 247 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ZNF292O60281 2723 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 EPG5Q9HCE0 2579 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ZFHX4Q86UP3 3567 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 DMXL1Q9Y485 3027 aa9.99□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PNMA6FA0A0J9YX94 578 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 GALR2O43603 387 aaPredicted RBP9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ICAM1P05362 532 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 MMP3P08254 477 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 TXNP10599 105 aaKnown RBP9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 CALML3P27482 149 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PDE4DQ08499 809 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 STK3Q13188 491 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 BAATQ14032 418 aaPredicted RBP9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 MBTPS1Q14703 1052 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 NTRK3Q16288 839 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ZNF618Q5T7W0 954 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 CCDC83Q8IWF9 413 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 BICD2Q8TD16 824 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 TOP1MTQ969P6 601 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 MSLNLQ96KJ4 702 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 C11orf84Q9BUA3 381 aaPredicted RBP9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 KATNAL1Q9BW62 490 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 BRMS1Q9HCU9 246 aa9.98□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PTPDC1A2A3K4 754 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 B4DLN1 442 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ZBTB5O15062 677 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 SCG2P13521 617 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 EDNRBP24530 442 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 GNA11P29992 359 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 CTNNB1P35222 781 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ADD1P35611 737 aaKnown RBP9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 NDUFV1P49821 464 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 MRPL12P52815 198 aaKnown RBP9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 SAFBQ15424 915 aaKnown RBP eCLIP9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PFKFB3Q16875 520 aaPredicted RBP9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 TRIM71Q2Q1W2 868 aaKnown RBP9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PLEKHG4Q58EX7 1191 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 SYDE2Q5VT97 1194 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 C7orf31Q8N865 590 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 SMRP1Q8NCR6 262 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 NSUN7Q8NE18 718 aaKnown RBP9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 KAT2BQ92831 832 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 COPS5Q92905 334 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PPP2R3CQ969Q6 453 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 MTMR8Q96EF0 704 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 AMNQ9BXJ7 453 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ORC3Q9UBD5 711 aaPredicted RBP9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PRR12Q9ULL5 1215 aa9.97□□□□□ -0.81
PDLIM1P3-201ENST00000582370 PLXNA4Q9HCM2 1894 aa9.96□□□□□ -0.81
PDLIM1P3-201ENST00000582370 ESYT2A0FGR8 921 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 H3BQV1 296 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 MMP1P03956 469 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 CDC27P30260 824 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 ICAM3P32942 547 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 COASYQ13057 564 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 ADAM15Q13444 863 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 ADGRF4Q8IZF3 695 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 FIBCD1Q8N539 461 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 NECAB1Q8N987 351 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 DNERQ8NFT8 737 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 AFG1LQ8WV93 481 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 NKD2Q969F2 451 aaPredicted RBP9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 MYL10Q9BUA6 226 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 PHF7Q9BWX1 381 aaPredicted RBP9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 SLC26A6Q9BXS9 759 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 RANBP17Q9H2T7 1088 aaKnown RBP9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 SENP2Q9HC62 589 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 FAM217BQ9NTX9 383 aaPredicted RBP9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 HDAC6Q9UBN7 1215 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 CNTNAP5Q8WYK1 1306 aa9.96□□□□□ -0.82
PDLIM1P3-201ENST00000582370 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 NFIBO00712 420 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 GRM6O15303 877 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 LINC01565O15544 149 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 ARIH2O95376 493 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 F2P00734 622 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 GH1P01241 217 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 GJB2P29033 226 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 FUT2Q10981 343 aa9.95□□□□□ -0.82
PDLIM1P3-201ENST00000582370 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms