RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 EML1O00423 815 aa25.07■■□□□ 1.6
CCDC47-204ENST00000582252 TBCAO75347 108 aaKnown RBP25.07■■□□□ 1.6
CCDC47-204ENST00000582252 TRIM21P19474 475 aaKnown RBP25.07■■□□□ 1.6
CCDC47-204ENST00000582252 CYP4A11Q02928 519 aa25.07■■□□□ 1.6
CCDC47-204ENST00000582252 EPHA7Q15375 998 aa25.07■■□□□ 1.6
CCDC47-204ENST00000582252 ZCWPW2Q504Y3 356 aa25.07■■□□□ 1.6
CCDC47-204ENST00000582252 MIIPQ5JXC2 388 aa25.07■■□□□ 1.6
CCDC47-204ENST00000582252 LRRC55Q6ZSA7 311 aa25.07■■□□□ 1.6
CCDC47-204ENST00000582252 PRRT2Q7Z6L0 340 aaPredicted RBP25.07■■□□□ 1.6
CCDC47-204ENST00000582252 PROCA1Q8NCQ7 364 aaPredicted RBP25.07■■□□□ 1.6
CCDC47-204ENST00000582252 HSD17B14Q9BPX1 270 aa25.07■■□□□ 1.6
CCDC47-204ENST00000582252 RAVER2Q9HCJ3 691 aaKnown RBP25.07■■□□□ 1.6
CCDC47-204ENST00000582252 NPHP3-ACAD11A0A0J9YXS1 232 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 GAP43P17677 238 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 PSMC6P62333 389 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 RAD9BQ6WBX8 426 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 ZNF397Q8NF99 534 aaPredicted RBP25.06■■□□□ 1.6
CCDC47-204ENST00000582252 BHMT2Q9H2M3 363 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 COL4A3BPQ9Y5P4 624 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 ADGRG1Q9Y653 693 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 A0A1W2PQJ5 194 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 TTC26A0AVF1 554 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 NFIBO00712 420 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 DYDC2Q96IM9 177 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 DNAJC7Q99615 494 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 REEP2Q9BRK0 252 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 NDST4Q9H3R1 872 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 ZNHIT6Q9NWK9 470 aaKnown RBP25.06■■□□□ 1.6
CCDC47-204ENST00000582252 DNAI1Q9UI46 699 aa25.06■■□□□ 1.6
CCDC47-204ENST00000582252 FRMPD4Q14CM0 1322 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 IPO5O00410 1097 aaKnown RBP25.05■■□□□ 1.6
CCDC47-204ENST00000582252 CHMP2AO43633 222 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 EDRF1Q3B7T1 1238 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 PCNX4Q63HM2 1172 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 TRIM65Q6PJ69 517 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 CATSPERGQ6ZRH7 1159 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 NACC1Q96RE7 527 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 KCND2Q9NZV8 630 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 TBC1D7Q9P0N9 293 aa25.05■■□□□ 1.6
CCDC47-204ENST00000582252 MYPNQ86TC9 1320 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 SLITRK3O94933 977 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 ZBED6P86452 979 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 CACNB1Q02641 598 aaPredicted RBP25.04■■□□□ 1.6
CCDC47-204ENST00000582252 CCDC40Q4G0X9 1142 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 MTERF4Q7Z6M4 381 aaKnown RBP25.04■■□□□ 1.6
CCDC47-204ENST00000582252 TPH2Q8IWU9 490 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 SCFD1Q8WVM8 642 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 EEF2KMTQ96G04 330 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 DESI2Q9BSY9 194 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 RGL1Q9NZL6 768 aa25.04■■□□□ 1.6
CCDC47-204ENST00000582252 ARP10275 920 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 OAZ1P54368 228 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 RAD51AP2Q09MP3 1159 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 CTTNQ14247 550 aaKnown RBP25.03■■□□□ 1.6
CCDC47-204ENST00000582252 MTF1Q14872 753 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 GLIS3Q8NEA6 775 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 SYTL5Q8TDW5 730 aaPredicted RBP25.03■■□□□ 1.6
CCDC47-204ENST00000582252 UNC45AQ9H3U1 944 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 COG2Q14746 738 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 CST9Q5W186 159 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 GADL1Q6ZQY3 521 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 TTYH3Q9C0H2 523 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 KCTD10Q9H3F6 313 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 L2HGDHQ9H9P8 463 aa25.03■■□□□ 1.6
CCDC47-204ENST00000582252 VWA5AO00534 786 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 DSG3P32926 999 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 MARSP56192 900 aaKnown RBP25.02■■□□□ 1.6
CCDC47-204ENST00000582252 ERVK-24P63145 666 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 SNAPC2Q13487 334 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 B3GNT9Q6UX72 402 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 FASTKD5Q7L8L6 764 aaKnown RBP25.02■■□□□ 1.6
CCDC47-204ENST00000582252 SFR1Q86XK3 245 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 NELFCDQ8IXH7 590 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 ZC3H3Q8IXZ2 948 aaKnown RBP25.02■■□□□ 1.6
CCDC47-204ENST00000582252 TRERF1Q96PN7 1200 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 COL20A1Q9P218 1284 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 UBIAD1Q9Y5Z9 338 aa25.02■■□□□ 1.6
CCDC47-204ENST00000582252 KIF3CO14782 793 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 CETN3O15182 167 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 CALUO43852 315 aaPredicted RBP25.01■■□□□ 1.59
CCDC47-204ENST00000582252 FAM13AO94988 1023 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 SLU7O95391 586 aaKnown RBP25.01■■□□□ 1.59
CCDC47-204ENST00000582252 CASQ1P31415 396 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 GNG11P61952 73 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 MUM1L1Q5H9M0 696 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 RINT1Q6NUQ1 792 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 MAP7D2Q96T17 732 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 MAF1Q9H063 256 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 JADE2Q9NQC1 790 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 OLFML3Q9NRN5 406 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 HOMER2Q9NSB8 354 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 HOXC10Q9NYD6 342 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 SEL1LQ9UBV2 794 aa25.01■■□□□ 1.59
CCDC47-204ENST00000582252 RNF225M0QZC1 329 aaPredicted RBP25■■□□□ 1.59
CCDC47-204ENST00000582252 TREML2Q5T2D2 321 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 XRRA1Q6P2D8 792 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 RNF207Q6ZRF8 634 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 MIER3Q7Z3K6 550 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 ATG4CQ96DT6 458 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 ERO1AQ96HE7 468 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms