RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 RIT2Q99578 217 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 ZNF302Q9NR11 478 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 TCEAL9Q9UHQ7 104 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 LTBP2Q14767 1821 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 IGKV6D-21A0A0A0MT36 114 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 MARCH6O60337 910 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 GCFC2P16383 781 aaKnown RBP23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 ATP4AP20648 1035 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 PPFIA1Q13136 1202 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 HABP4Q5JVS0 413 aaKnown RBP23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 MCTP1Q6DN14 999 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 LMBR1Q8WVP7 490 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 TRAPPC12Q8WVT3 735 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 FOXP1Q9H334 677 aaPredicted RBP23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 KCNMB3Q9NPA1 279 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 DISC1Q9NRI5 854 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 GABBR1Q9UBS5 961 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 TRPC6Q9Y210 931 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 PCDHA10Q9Y5I2 948 aa23.37■■□□□ 1.33
PPP4R1-221ENST00000582240 PSAPP07602 524 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 INSRRP14616 1297 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 NBR1Q14596 966 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 SHHQ15465 462 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 ZNF174Q15697 407 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 GRIK4Q16099 956 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 FAM160B1Q5W0V3 765 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 PDXDC2PQ6P474 469 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 C16orf59Q7L2K0 433 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 PLPPR4Q7Z2D5 763 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 MIER3Q7Z3K6 550 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 TMEM199Q8N511 208 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 RETREG2Q8NC44 543 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 KIF3AQ9Y496 699 aa23.36■■□□□ 1.33
PPP4R1-221ENST00000582240 K7ELQ4 463 aaPredicted RBP23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 EML1O00423 815 aa23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 HOXC8P31273 242 aa23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 MCM7P33993 719 aa23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 PTK7Q13308 1070 aa23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 UGCGQ16739 394 aa23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 TRIM71Q2Q1W2 868 aaKnown RBP23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 LARP1BQ659C4 914 aaKnown RBP23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 NOSTRINQ8IVI9 506 aa23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 NAP1L4Q99733 375 aaKnown RBP23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 TMEM60Q9H2L4 133 aa23.35■■□□□ 1.33
PPP4R1-221ENST00000582240 POTEB3A0JP26 581 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 WDR64B1ANS9 1081 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 H3BQV1 296 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 ADAM17P78536 824 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 BFSP2Q13515 415 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 POTEBQ6S5H4 581 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 B3GNT9Q6UX72 402 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 RUFY4Q6ZNE9 571 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 DEFB128Q7Z7B8 93 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 CKAP2LQ8IYA6 745 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 SMAP1Q8IYB5 467 aaPredicted RBP23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 VWCEQ96DN2 955 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 VAV3Q9UKW4 847 aa23.34■■□□□ 1.33
PPP4R1-221ENST00000582240 IQCF3P0C7M6 154 aa23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 CKBP12277 381 aa23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 PPIGQ13427 754 aaKnown RBP eCLIP23.33■■□□□ 1.332e-10■■□□□ 12.5
PPP4R1-221ENST00000582240 MARCH8Q5T0T0 291 aa23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 SERINC5Q86VE9 423 aa23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 AFAP1L1Q8TED9 768 aa23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 SNX21Q969T3 373 aa23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 FAM20AQ96MK3 541 aa23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.33■■□□□ 1.332e-13■■■■□ 22.1
PPP4R1-221ENST00000582240 MAFBQ9Y5Q3 323 aaPredicted RBP23.33■■□□□ 1.33
PPP4R1-221ENST00000582240 NRCAMQ92823 1304 aa23.33■■□□□ 1.32
PPP4R1-221ENST00000582240 ZNF862O60290 1169 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 GNAT1P11488 350 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 U2AF2P26368 475 aaKnown RBP eCLIP23.32■■□□□ 1.321e-7■■■■□ 23.2
PPP4R1-221ENST00000582240 THPOP40225 353 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 JAK3P52333 1124 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 CALCRLQ16602 461 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 ZNF618Q5T7W0 954 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 ZNF365Q70YC5 407 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 TDHQ8IZJ6 230 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 IL23AQ9NPF7 189 aa23.32■■□□□ 1.32
PPP4R1-221ENST00000582240 NEMFO60524 1076 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 BAG4O95429 457 aaKnown RBP23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 CTSHP09668 335 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 SELPP16109 830 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 TXKP42681 527 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 TOB1P50616 345 aaPredicted RBP23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 TTC38Q5R3I4 469 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 TMEM240Q5SV17 173 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 NCAPH2Q6IBW4 605 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 CCDC155Q8N6L0 562 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 BANK1Q8NDB2 785 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 CAGE1Q8TC20 777 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 ATP8B4Q8TF62 1192 aa23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 TRIP12Q14669 1992 aaPredicted RBP23.31■■□□□ 1.32
PPP4R1-221ENST00000582240 PITPNM1O00562 1244 aa23.3■■□□□ 1.32
PPP4R1-221ENST00000582240 TBX3O15119 743 aa23.3■■□□□ 1.32
PPP4R1-221ENST00000582240 HBP1O60381 514 aa23.3■■□□□ 1.32
PPP4R1-221ENST00000582240 SFNP31947 248 aa23.3■■□□□ 1.32
PPP4R1-221ENST00000582240 GPNMBQ14956 572 aa23.3■■□□□ 1.32
PPP4R1-221ENST00000582240 TRAF7Q6Q0C0 670 aa23.3■■□□□ 1.32
PPP4R1-221ENST00000582240 LRRC8DQ7L1W4 858 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms