RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SLC9A7Q96T83 725 aa22.14■■□□□ 1.13
SREBF1-220ENST00000581707 C22orf23Q9BZE7 217 aa22.14■■□□□ 1.13
SREBF1-220ENST00000581707 TBC1D22BQ9NU19 505 aa22.14■■□□□ 1.13
SREBF1-220ENST00000581707 YBX2Q9Y2T7 364 aaKnown RBP22.14■■□□□ 1.13
SREBF1-220ENST00000581707 EDIL3O43854 480 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 GRIN2CQ14957 1233 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 ABHD15Q6UXT9 468 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 NECAB1Q8N987 351 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 TBCKQ8TEA7 893 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 TNPO1Q92973 898 aaKnown RBP22.13■■□□□ 1.13
SREBF1-220ENST00000581707 NKX2-4Q9H2Z4 354 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 TRPC6Q9Y210 931 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 PCDHA11Q9Y5I1 949 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 CHD9Q3L8U1 2897 aa22.13■■□□□ 1.13
SREBF1-220ENST00000581707 IGKV6D-21A0A0A0MT36 114 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 RRN3P2A6NIE6 340 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 M0R2N6 131 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 DTNBO60941 627 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 CTDNEP1O95476 244 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 CTSHP09668 335 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 INSRRP14616 1297 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 XBP1P17861 261 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 KCNJ6P48051 423 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 PLCB4Q15147 1175 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 NPY5RQ15761 445 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 ME3Q16798 604 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 MARCH8Q5T0T0 291 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 TAF2Q6P1X5 1199 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 MYLIPQ8WY64 445 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 LENG9Q96B70 501 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 SLC28A3Q9HAS3 691 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 ORC3Q9UBD5 711 aaPredicted RBP22.12■■□□□ 1.13
SREBF1-220ENST00000581707 TUBE1Q9UJT0 475 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 KCNJ14Q9UNX9 436 aa22.12■■□□□ 1.13
SREBF1-220ENST00000581707 ABHD14A-ACY1A0A1B0GW23 586 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 MBLAC1A4D2B0 266 aaPredicted RBP22.11■■□□□ 1.13
SREBF1-220ENST00000581707 BACH1O14867 736 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 MYOGP15173 224 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 SLC26A2P50443 739 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 WDR5P61964 334 aaKnown RBP22.11■■□□□ 1.13
SREBF1-220ENST00000581707 IGBP1P78318 339 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 IKBKEQ14164 716 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 TCTN1Q2MV58 587 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 C8orf34Q49A92 452 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 FAM160B1Q5W0V3 765 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 ZNF746Q6NUN9 644 aaPredicted RBP22.11■■□□□ 1.13
SREBF1-220ENST00000581707 MIS18BP1Q6P0N0 1132 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 RUFY4Q6ZNE9 571 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 RPAINQ86UA6 219 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 PHF20Q9BVI0 1012 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 TCEAL9Q9UHQ7 104 aa22.11■■□□□ 1.13
SREBF1-220ENST00000581707 POTEB3A0JP26 581 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 EFCAB14O75071 495 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 LARGE1O95461 756 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 KRT76Q01546 638 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 FAM26DQ5JW98 314 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 POTEBQ6S5H4 581 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 RSPH3Q86UC2 560 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 HERC6Q8IVU3 1022 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 DBF4BQ8NFT6 615 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 WASF1Q92558 559 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 GTF3C6Q969F1 213 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 ZNF302Q9NR11 478 aa22.1■■□□□ 1.13
SREBF1-220ENST00000581707 RBAK-RBAKDNI3L0D1 243 aa22.09■■□□□ 1.13
SREBF1-220ENST00000581707 NONOQ15233 471 aaKnown RBP eCLIP22.09■■□□□ 1.13
SREBF1-220ENST00000581707 PLEKHG4Q58EX7 1191 aa22.09■■□□□ 1.13
SREBF1-220ENST00000581707 SWSAP1Q6NVH7 229 aa22.09■■□□□ 1.13
SREBF1-220ENST00000581707 PDXDC2PQ6P474 469 aa22.09■■□□□ 1.13
SREBF1-220ENST00000581707 KRT25Q7Z3Z0 450 aa22.09■■□□□ 1.13
SREBF1-220ENST00000581707 CCDC60Q8IWA6 550 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-220ENST00000581707 SMAP1Q8IYB5 467 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-220ENST00000581707 DNAJB3Q8WWF6 145 aa22.09■■□□□ 1.13
SREBF1-220ENST00000581707 MYH9P35579 1960 aaKnown RBP22.08■■□□□ 1.13
SREBF1-220ENST00000581707 PTPRSQ13332 1948 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 CYP3A7-CYP3A51PA0A087WV96 503 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 KIF28PB7ZC32 967 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 MSH4O15457 936 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 FOSL2P15408 326 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 CYP3A7P24462 503 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 SEPT8Q92599 483 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 OSBPL7Q9BZF2 842 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 GJB4Q9NTQ9 266 aa22.08■■□□□ 1.13
SREBF1-220ENST00000581707 HBP1O60381 514 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 CHRNA1P02708 482 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 PSAPP07602 524 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 FDPSP14324 419 aaKnown RBP22.07■■□□□ 1.12
SREBF1-220ENST00000581707 DEFB103AP81534 67 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 Q4G0T1 1027 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 PPP2R2DQ66LE6 453 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 ATP8B4Q8TF62 1192 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 TRAPPC12Q8WVT3 735 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 SLC5A5Q92911 643 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 ZBTB10Q96DT7 871 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 RIT2Q99578 217 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 PRDM12Q9H4Q4 367 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 PCDHA10Q9Y5I2 948 aa22.07■■□□□ 1.12
SREBF1-220ENST00000581707 CCDC194A0A1B0GVG4 234 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 WDR64B1ANS9 1081 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 GAS7O60861 476 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 TDP2O95551 362 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms