RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 GPR20Q99678 358 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 BCAS3Q9H6U6 928 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 FRYLO94915 3013 aa16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 FSCN2O14926 492 aa16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 KRT37O76014 449 aa16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 PDE12Q6L8Q7 609 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 DGLUCYQ7Z3D6 616 aa16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 RTN4RL1Q86UN2 441 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 FTHL17Q9BXU8 183 aa16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 KAT6AQ92794 2004 aa16.1■□□□□ 0.17
CSNK1D-219ENST00000581660 FGAP02671 866 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 STAG3L1P0CL83 205 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 HOXB8P17481 243 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 CCND2P30279 289 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 NEDD9Q14511 834 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 PAN2Q504Q3 1202 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 RSPH3Q86UC2 560 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 AMNQ9BXJ7 453 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 SQORQ9Y6N5 450 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 CHD6Q8TD26 2715 aa16.09■□□□□ 0.17
CSNK1D-219ENST00000581660 SPTBN2O15020 2390 aa16.08■□□□□ 0.17
CSNK1D-219ENST00000581660 MBLAC1A4D2B0 266 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 TECP42680 631 aa16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 ERVFC1P60507 584 aa16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 PNMA1Q8ND90 353 aa16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 MICAL1Q8TDZ2 1067 aa16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 INPP4AQ96PE3 977 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 DCTPP1Q9H773 170 aa16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 PCDHB12Q9Y5F1 795 aa16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 CDY2AQ9Y6F7 541 aa16.08■□□□□ 0.16
CSNK1D-219ENST00000581660 SPATA31C2B4DYI2 1134 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 RPLP2P05387 115 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 SCG2P13521 617 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 CD52P31358 61 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 NT5C2P49902 561 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 GNPTABQ3T906 1256 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 CWF19L1Q69YN2 538 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 NECTIN4Q96NY8 510 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 SMOC2Q9H3U7 446 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
CSNK1D-219ENST00000581660 C2CD4DB7Z1M9 353 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 STAM2O75886 525 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 FGF18O76093 207 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 HOXA13P31271 388 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 GATMP50440 423 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 MRPS6P82932 125 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 DIEXFQ68CQ4 756 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 FAM43BQ6ZT52 329 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 CYFIP1Q7L576 1253 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 TBC1D10CQ8IV04 446 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 CCDC105Q8IYK2 499 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 MFSD1Q9H3U5 465 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 AAASQ9NRG9 546 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 HELLSQ9NRZ9 838 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 TUBE1Q9UJT0 475 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
CSNK1D-219ENST00000581660 PPP1R11O60927 126 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 AOC1P19801 751 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 MRPS9P82933 396 aaKnown RBP16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 MARCH8Q5T0T0 291 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 DNAJB3Q8WWF6 145 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 ESR2Q92731 530 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 ZFP91Q96JP5 570 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 POMKQ9H5K3 350 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 TELO2Q9Y4R8 837 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
CSNK1D-219ENST00000581660 FNDC1Q4ZHG4 1894 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 FIBPO43427 364 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 DHX16O60231 1041 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 PARP1P09874 1014 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 HAND2P61296 217 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 ANGPT1Q15389 498 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 GRIK4Q16099 956 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 ZDHHC14Q8IZN3 488 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 CNTNAP3BQ96NU0 1288 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 SENP7Q9BQF6 1050 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 APOL5Q9BWW9 433 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 CNTNAP3Q9BZ76 1288 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 ADAM7Q9H2U9 754 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 KAT14Q9H8E8 782 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 DLL3Q9NYJ7 618 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms