RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 OR52Z1P0C646 297 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 SMIM10L2AP0DMW4 78 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 SMIM10L2BP0DMW5 78 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 GNAT1P11488 350 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 ATP2B1P20020 1258 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 MIER3Q7Z3K6 550 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 ATP8B4Q8TF62 1192 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 GJA10Q969M2 543 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 FAM167AQ96KS9 214 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 UIMC1Q96RL1 719 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 ZSCAN16Q9H4T2 348 aaPredicted RBP17.35■□□□□ 0.37
CDC6-204ENST00000580824 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 PRKAG2Q9UGJ0 569 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 PCDHA12Q9UN75 941 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
CDC6-204ENST00000580824 TRIP12Q14669 1992 aaPredicted RBP17.35■□□□□ 0.37
CDC6-204ENST00000580824 BMP15O95972 392 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 COL1A2P08123 1366 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 PRPHP41219 470 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 ADAM17P78536 824 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 RBL2Q08999 1139 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 RESTQ13127 1097 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 ZNF174Q15697 407 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 GDF6Q6KF10 455 aaPredicted RBP17.34■□□□□ 0.37
CDC6-204ENST00000580824 SWSAP1Q6NVH7 229 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 PDXDC2PQ6P474 469 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 ATP6V0A1Q93050 837 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 CTAGE1Q96RT6 745 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 TRPV6Q9H1D0 765 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 TMEM60Q9H2L4 133 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 RNPEPQ9H4A4 650 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 TTC12Q9H892 705 aaPredicted RBP17.34■□□□□ 0.37
CDC6-204ENST00000580824 TRMT13Q9NUP7 481 aaKnown RBP17.34■□□□□ 0.37
CDC6-204ENST00000580824 TMEM39AQ9NV64 488 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 PCDHB6Q9Y5E3 794 aa17.34■□□□□ 0.37
CDC6-204ENST00000580824 C17orf102A2RUQ5 167 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 RRN3P2A6NIE6 340 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 CHMP2AO43633 222 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 HBP1O60381 514 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 DKC1O60832 514 aaKnown RBP eCLIP17.33■□□□□ 0.36
CDC6-204ENST00000580824 PPFIA1Q13136 1202 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 PLCB4Q15147 1175 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 EPHA7Q15375 998 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 PTGISQ16647 500 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 NEK9Q8TD19 979 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 LMBR1Q8WVP7 490 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 BBXQ8WY36 941 aaPredicted RBP17.33■□□□□ 0.36
CDC6-204ENST00000580824 GABBR1Q9UBS5 961 aa17.33■□□□□ 0.36
CDC6-204ENST00000580824 POTEB3A0JP26 581 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 MBLAC1A4D2B0 266 aaPredicted RBP17.32■□□□□ 0.36
CDC6-204ENST00000580824 TRIM43BA6NCK2 446 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 H0YGN5 161 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 EML1O00423 815 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 RPLP2P05387 115 aaKnown RBP17.32■□□□□ 0.36
CDC6-204ENST00000580824 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDC6-204ENST00000580824 ATP2C1P98194 919 aaPredicted RBP17.32■□□□□ 0.36
CDC6-204ENST00000580824 PTGDRQ13258 359 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 PTK7Q13308 1070 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 PRPF38BQ5VTL8 546 aaKnown RBP17.32■□□□□ 0.36
CDC6-204ENST00000580824 ARL6IP4Q66PJ3 421 aaKnown RBP17.32■□□□□ 0.36
CDC6-204ENST00000580824 POTEBQ6S5H4 581 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 SERINC5Q86VE9 423 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 CCDC155Q8N6L0 562 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 CAGE1Q8TC20 777 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 TRIM43Q96BQ3 446 aaPredicted RBP17.32■□□□□ 0.36
CDC6-204ENST00000580824 NOC4LQ9BVI4 516 aaKnown RBP17.32■□□□□ 0.36
CDC6-204ENST00000580824 NOD1Q9Y239 953 aa17.32■□□□□ 0.36
CDC6-204ENST00000580824 MYH15Q9Y2K3 1946 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 CAND2O75155 1236 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 TIMP1P01033 207 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
CDC6-204ENST00000580824 ATP4AP20648 1035 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 MARK3P27448 753 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 TXKP42681 527 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 QARSP47897 775 aaKnown RBP17.31■□□□□ 0.36
CDC6-204ENST00000580824 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 PSMC5P62195 406 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 NBR1Q14596 966 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 GRIK4Q16099 956 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 TAF2Q6P1X5 1199 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 SH3RF1Q7Z6J0 888 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 FERMT3Q86UX7 667 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 PRDM5Q9NQX1 630 aaPredicted RBP17.31■□□□□ 0.36
CDC6-204ENST00000580824 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 TRPC6Q9Y210 931 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 MORC2Q9Y6X9 1032 aaPredicted RBP17.31■□□□□ 0.36
CDC6-204ENST00000580824 TANC1Q9C0D5 1861 aa17.31■□□□□ 0.36
CDC6-204ENST00000580824 ZNF862O60290 1169 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 LYPLA2O95372 231 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 OATP04181 439 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 INSRRP14616 1297 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 RAG1P15918 1043 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 BFSP2Q13515 415 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 HIC1Q14526 733 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 PDIA5Q14554 519 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 XKR3Q5GH77 459 aa17.3■□□□□ 0.36
CDC6-204ENST00000580824 ZNF484Q5JVG2 852 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms