RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 GTF2F1P35269 517 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 NUBP1P53384 320 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 RRP1P56182 461 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 MRPS9P82933 396 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CAMK1Q14012 370 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FBXO47Q5MNV8 452 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 IER5LQ5T953 404 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 TSHZ1Q6ZSZ6 1077 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 NLRX1Q86UT6 975 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 TRIM50Q86XT4 487 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 NPAS4Q8IUM7 802 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 SPPL3Q8TCT6 385 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 TNPO1Q92973 898 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CDHR1Q96JP9 859 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 PHOX2BQ99453 314 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 PHF7Q9BWX1 381 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 BCAS3Q9H6U6 928 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 RIOX1Q9H6W3 641 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 DIAPH3Q9NSV4 1193 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CLEC1BQ9P126 229 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 TUBE1Q9UJT0 475 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FRYLO94915 3013 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ITGB1P05556 798 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ATF7P17544 494 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 MGAT3Q09327 533 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 TCF15Q12870 199 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PPFIA1Q13136 1202 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 IER5Q5VY09 327 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PCNX4Q63HM2 1172 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ZFP91Q96JP5 570 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PIGSQ96S52 555 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ERAP1Q9NZ08 941 aa14.08□□□□□ -0.16
CDK5RAP3-216ENST00000579853 MBLAC1A4D2B0 266 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 RBAK-RBAKDNI3L0D1 243 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 GFRA3O60609 400 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CSPG5O95196 566 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 TCF7P36402 384 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 NRIP1P48552 1158 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 UBE3AQ05086 875 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 TRDNQ13061 729 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SEMA3FQ13275 785 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SEC23AQ15436 765 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 GRIK4Q16099 956 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 DIEXFQ68CQ4 756 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CWC27Q6UX04 472 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 KLHL23Q8NBE8 558 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 POF1BQ8WVV4 589 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CUL5Q93034 780 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CDCA3Q99618 268 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 RTEL1Q9NZ71 1219 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 USP15Q9Y4E8 981 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 MRPL42Q9Y6G3 142 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 DOCK5Q9H7D0 1870 aa14.07□□□□□ -0.16
CDK5RAP3-216ENST00000579853 EP300Q09472 2414 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 RRN3P2A6NIE6 340 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 M0QZ92 97 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SRGAP2BP0DMP2 458 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 MRPS6P82932 125 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SP4Q02446 784 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 GRM4Q14833 912 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CRIPAKQ8N1N5 446 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 DNAJB3Q8WWF6 145 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SEPT1Q8WYJ6 367 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 GPRASP2Q96D09 838 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SMARCAD1Q9H4L7 1026 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 TLE6Q9H808 572 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 AAASQ9NRG9 546 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CDY2AQ9Y6F7 541 aa14.06□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ERICH2A1L162 156 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SCG2P13521 617 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 DNAJB1P25685 340 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 AVPR2P30518 371 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CD52P31358 61 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PDE12Q6L8Q7 609 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ADGRD2Q7Z7M1 963 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SMARCC2Q8TAQ2 1214 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 MICAL1Q8TDZ2 1067 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ATOH1Q92858 354 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 GLG1Q92896 1179 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 RPGRIP1Q96KN7 1286 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 LRFN2Q9ULH4 789 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 BARX2Q9UMQ3 279 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 KMT2EQ8IZD2 1858 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 DCHS1Q96JQ0 3298 aa14.05□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PIK3CDO00329 1044 aa14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 MAFGO15525 162 aa14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SART3Q15020 963 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 RBM23Q86U06 439 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SUSD6Q92537 303 aa14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ASIC4Q96FT7 647 aa14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 NEK1Q96PY6 1258 aa14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 OSBPL3Q9H4L5 887 aa14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-216ENST00000579853 CYTH3O43739 400 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 GLP2RO95838 553 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PAK2Q13177 524 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms