RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 BRF1Q92994 677 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 HLA-CQ95604 372 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 NECAB3Q96P71 396 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 UIMC1Q96RL1 719 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CUL9Q8IWT3 2517 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CCDC196A0A1B0GTZ2 297 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 M0QZ92 97 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 BACH1O14867 736 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CHRNA1P02708 482 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 INSRRP14616 1297 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 IBSPP21815 317 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 HTRA4P83105 476 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 AKAP17AQ02040 695 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TMEM62Q0P6H9 643 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ITGB3BPQ13352 177 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 AP3B2Q13367 1082 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FAM26DQ5JW98 314 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TNPO1Q92973 898 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TOP1MTQ969P6 601 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PCYT2Q99447 389 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 GLT8D2Q9H1C3 349 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 AGO4Q9HCK5 861 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 COG5Q9UP83 839 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SNX14Q9Y5W7 946 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CDY2AQ9Y6F7 541 aa10.5□□□□□ -0.73
CDK5RAP3-211ENST00000578996 REV3LO60673 3130 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 RRN3P2A6NIE6 340 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CSPG5O95196 566 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SCG2P13521 617 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 HSPA4P34932 840 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SREBF1P36956 1147 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 STAT5BP51692 787 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 RCAN1P53805 252 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MGAT3Q09327 533 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 LPIN1Q14693 890 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PLCB4Q15147 1175 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PFKFB3Q16875 520 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 EPC2Q52LR7 807 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MARCH8Q5T0T0 291 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PLA2G4DQ86XP0 818 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TRAPPC12Q8WVT3 735 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PHKBQ93100 1093 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 C6orf50Q9HD87 102 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 LMCD1Q9NZU5 365 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TCEAL9Q9UHQ7 104 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 NFASCO94856 1347 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MUC3AQ02505 3323 aa10.49□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MICAL3Q7RTP6 2002 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MBLAC1A4D2B0 266 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FAM86B1E9PN63 330 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FAM86B2P0C5J1 330 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 BMP1P13497 986 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 RPS6KB1P23443 525 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PSMA5P28066 241 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CD52P31358 61 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CTNNB1P35222 781 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CLK2P49760 499 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CCT2P78371 535 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MRPS6P82932 125 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 GPM6BQ13491 265 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PTPROQ16827 1216 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FBXO47Q5MNV8 452 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 IER5Q5VY09 327 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TSHZ1Q6ZSZ6 1077 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 EP400NLQ6ZTU2 488 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TRMT1LQ7Z2T5 733 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 RPAINQ86UA6 219 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TMEM192Q8IY95 271 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CKAP2LQ8IYA6 745 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FIBCD1Q8N539 461 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 IL17RAQ96F46 866 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SAMD11Q96NU1 681 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ZNF577Q9BSK1 485 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SLC26A6Q9BXS9 759 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 GINS2Q9Y248 185 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TRPV2Q9Y5S1 764 aa10.48□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SIP14410 1827 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TRANK1O15050 2925 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MEIS1O00470 390 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 REC8O95072 547 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CCNE2O96020 404 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PAK2Q13177 524 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FAM160B1Q5W0V3 765 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MIS18BP1Q6P0N0 1132 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PDXDC2PQ6P474 469 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PLPPR4Q7Z2D5 763 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CCDC60Q8IWA6 550 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 REXO1Q8N1G1 1221 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 RASGRP4Q8TDF6 673 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 UBE2ZQ9H832 354 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ZNF302Q9NR11 478 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms