RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 MTMR9Q96QG7 549 aa17.35■□□□□ 0.37
IFT20-208ENST00000578985 RNPEPQ9H4A4 650 aa17.35■□□□□ 0.37
IFT20-208ENST00000578985 PRDM5Q9NQX1 630 aaPredicted RBP17.35■□□□□ 0.37
IFT20-208ENST00000578985 ZNF302Q9NR11 478 aa17.35■□□□□ 0.37
IFT20-208ENST00000578985 PDLIM7Q9NR12 457 aa17.35■□□□□ 0.37
IFT20-208ENST00000578985 TRMT13Q9NUP7 481 aaKnown RBP17.35■□□□□ 0.37
IFT20-208ENST00000578985 TMEM39AQ9NV64 488 aa17.35■□□□□ 0.37
IFT20-208ENST00000578985 VAV3Q9UKW4 847 aa17.35■□□□□ 0.37
IFT20-208ENST00000578985 ZMYND8Q9ULU4 1186 aaPredicted RBP17.35■□□□□ 0.37
IFT20-208ENST00000578985 PCDHB6Q9Y5E3 794 aa17.35■□□□□ 0.37
IFT20-208ENST00000578985 TXKP42681 527 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 SLC26A2P50443 739 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 GDF6Q6KF10 455 aaPredicted RBP17.34■□□□□ 0.37
IFT20-208ENST00000578985 PDXDC2PQ6P474 469 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 SH3RF1Q7Z6J0 888 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 AFAP1L1Q8TED9 768 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 GABBR1Q9UBS5 961 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 PRKAG2Q9UGJ0 569 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 GTF2IRD1Q9UHL9 959 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 PCDHA12Q9UN75 941 aa17.34■□□□□ 0.37
IFT20-208ENST00000578985 H0YGN5 161 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 EML1O00423 815 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 KIAA0355O15063 1070 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 OR52Z1P0C646 297 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 PDIA4P13667 645 aaKnown RBP17.33■□□□□ 0.36
IFT20-208ENST00000578985 SYN1P17600 705 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 RESTQ13127 1097 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 PLCB4Q15147 1175 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 PTGISQ16647 500 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 TTC12Q9H892 705 aaPredicted RBP17.33■□□□□ 0.36
IFT20-208ENST00000578985 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.36
IFT20-208ENST00000578985 NOD1Q9Y239 953 aa17.33■□□□□ 0.36
IFT20-208ENST00000578985 C17orf102A2RUQ5 167 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 TRIM43BA6NCK2 446 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 GNAT1P11488 350 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 ZNF200P98182 395 aaPredicted RBP17.32■□□□□ 0.36
IFT20-208ENST00000578985 PTGDRQ13258 359 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 HIC1Q14526 733 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 NCAPH2Q6IBW4 605 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 C4orf32Q8N8J7 132 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 TRIM43Q96BQ3 446 aaPredicted RBP17.32■□□□□ 0.36
IFT20-208ENST00000578985 SETD4Q9NVD3 440 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 TBX21Q9UL17 535 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 TRPC6Q9Y210 931 aa17.32■□□□□ 0.36
IFT20-208ENST00000578985 MAFBQ9Y5Q3 323 aaPredicted RBP17.32■□□□□ 0.36
IFT20-208ENST00000578985 IGSF9BQ9UPX0 1349 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 POTEB3A0JP26 581 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 CYP2C9P11712 490 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 HOXC8P31273 242 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 SPIRE1Q08AE8 756 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 PPFIA1Q13136 1202 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 EPHA7Q15375 998 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 POTEBQ6S5H4 581 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 ATP8B4Q8TF62 1192 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 TNPO1Q92973 898 aaKnown RBP17.31■□□□□ 0.36
IFT20-208ENST00000578985 ZSCAN16Q9H4T2 348 aaPredicted RBP17.31■□□□□ 0.36
IFT20-208ENST00000578985 LTBP2Q14767 1821 aa17.31■□□□□ 0.36
IFT20-208ENST00000578985 NRCAMQ92823 1304 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 MYH15Q9Y2K3 1946 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 RRN3P2A6NIE6 340 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 LAD1O00515 517 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 HBP1O60381 514 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 INSRRP14616 1297 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 RAG1P15918 1043 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 ATP4AP20648 1035 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 GRIK4Q16099 956 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 UGCGQ16739 394 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 FAM167AQ96KS9 214 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 CEP290O15078 2479 aa17.3■□□□□ 0.36
IFT20-208ENST00000578985 TREHO43280 583 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 ZNF862O60290 1169 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 TIMP1P01033 207 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 P4HBP07237 508 aaKnown RBP17.29■□□□□ 0.36
IFT20-208ENST00000578985 TECP42680 631 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 PSMC5P62195 406 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 IGBP1P78318 339 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 PRKCEQ02156 737 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 TMEM266Q2M3C6 531 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 FOXD4L5Q5VV16 416 aaPredicted RBP17.29■□□□□ 0.36
IFT20-208ENST00000578985 BANK1Q8NDB2 785 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 FOXD4L4Q8WXT5 416 aaPredicted RBP17.29■□□□□ 0.36
IFT20-208ENST00000578985 BBXQ8WY36 941 aaPredicted RBP17.29■□□□□ 0.36
IFT20-208ENST00000578985 LBHD1Q9BQE6 289 aaPredicted RBP17.29■□□□□ 0.36
IFT20-208ENST00000578985 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
IFT20-208ENST00000578985 HIPK3Q9H422 1215 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 EVPLQ92817 2033 aa17.29■□□□□ 0.36
IFT20-208ENST00000578985 BMP15O95972 392 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 OATP04181 439 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
IFT20-208ENST00000578985 ITGB8P26012 769 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 PRPHP41219 470 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 QARSP47897 775 aaKnown RBP17.28■□□□□ 0.36
IFT20-208ENST00000578985 ADAM17P78536 824 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
IFT20-208ENST00000578985 PTK7Q13308 1070 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 ZNF484Q5JVG2 852 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms