RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 CPA4Q9UI42 421 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 PTPRFP10586 1907 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 PFASO15067 1338 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 BICDL2A1A5D9 508 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 PDHXO00330 501 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 EML1O00423 815 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 MAFGO15525 162 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 CHMP2AO43633 222 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 STAM2O75886 525 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 ECM2O94769 699 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-218ENST00000578469 NR3C2P08235 984 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 ATP1A3P13637 1013 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 ZNF18P17022 549 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 GRK4P32298 578 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 POTEGQ6S5H5 508 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 POTEEQ6S8J3 1075 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 GPBP1Q86WP2 473 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 SYT2Q8N9I0 419 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-218ENST00000578469 ANKRD20A12PQ8NF67 263 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 TRIM47Q96LD4 638 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 PARK7Q99497 189 aaKnown RBP18.86■□□□□ 0.61
SREBF1-218ENST00000578469 ASCC2Q9H1I8 757 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-218ENST00000578469 UNC45AQ9H3U1 944 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 A1CFQ9NQ94 594 aaKnown RBP18.86■□□□□ 0.61
SREBF1-218ENST00000578469 ZKSCAN5Q9Y2L8 839 aa18.86■□□□□ 0.61
SREBF1-218ENST00000578469 EYA4O95677 639 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 SLC25A27O95847 323 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 HERVK_113P62684 666 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 CYP4A11Q02928 519 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 SPAG1Q07617 926 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 MIER3Q7Z3K6 550 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 VSIG10LQ86VR7 867 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 TPH2Q8IWU9 490 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 ANKRD35Q8N283 1001 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 NOC3LQ8WTT2 800 aaKnown RBP18.85■□□□□ 0.61
SREBF1-218ENST00000578469 GPRASP2Q96D09 838 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 DYDC2Q96IM9 177 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 MED15Q96RN5 788 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 CTAGE1Q96RT6 745 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 HSD17B14Q9BPX1 270 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 SPATC1LQ9H0A9 340 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 PANK4Q9NVE7 773 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 IMPACTQ9P2X3 320 aa18.85■□□□□ 0.61
SREBF1-218ENST00000578469 CYP11B2P19099 503 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 SLC12A3P55017 1021 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 MTFR1Q15390 333 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 FILIP1LQ4L180 1135 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 B3GNT9Q6UX72 402 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 CCDC186Q7Z3E2 898 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 DNERQ8NFT8 737 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 GTF3C2Q8WUA4 911 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-218ENST00000578469 DNAJC19Q96DA6 116 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 CDHR1Q96JP9 859 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 NACC1Q96RE7 527 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 IWS1Q96ST2 819 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 SAMSN1Q9NSI8 373 aaKnown RBP18.84■□□□□ 0.61
SREBF1-218ENST00000578469 RGL1Q9NZL6 768 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 BTBD7Q9P203 1132 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 PNMA3Q9UL41 463 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 MAPK8IP1Q9UQF2 711 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 NR2E3Q9Y5X4 410 aa18.84■□□□□ 0.61
SREBF1-218ENST00000578469 SLITRK3O94933 977 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 GJB1P08034 283 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 CCNE1P24864 410 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 GJA8P48165 433 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 FCGRTP55899 365 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 GSDMDP57764 484 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 STK4Q13043 487 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 CTTNQ14247 550 aaKnown RBP18.83■□□□□ 0.6
SREBF1-218ENST00000578469 GNPTABQ3T906 1256 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 CDKAL1Q5VV42 579 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 NCAPG2Q86XI2 1143 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 P2RX5Q93086 422 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 PKD2L1Q9P0L9 805 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
SREBF1-218ENST00000578469 A0A0G2JMZ2 1700 aa18.83■□□□□ 0.6
SREBF1-218ENST00000578469 B4DLN1 442 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 DDX39AO00148 427 aaKnown RBP18.82■□□□□ 0.6
SREBF1-218ENST00000578469 KIF20AO95235 890 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 P4HBP07237 508 aaKnown RBP18.82■□□□□ 0.6
SREBF1-218ENST00000578469 CCL5P13501 91 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 KRT76Q01546 638 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 COASYQ13057 564 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 MOGSQ13724 837 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 GUF1Q8N442 669 aaKnown RBP18.82■□□□□ 0.6
SREBF1-218ENST00000578469 SLAIN1Q8ND83 568 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 PURBQ96QR8 312 aaKnown RBP18.82■□□□□ 0.6
SREBF1-218ENST00000578469 RNF208Q9H0X6 261 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 SLC39A2Q9NP94 309 aa18.82■□□□□ 0.6
SREBF1-218ENST00000578469 ADD3Q9UEY8 706 aaKnown RBP18.82■□□□□ 0.6
SREBF1-218ENST00000578469 ADGRA2Q96PE1 1338 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 DHX15O43143 795 aaKnown RBP18.81■□□□□ 0.6
SREBF1-218ENST00000578469 FCER1AP12319 257 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 PTGS1P23219 599 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 SFNP31947 248 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 JAK3P52333 1124 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 PSMC6P62333 389 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 EHHADHQ08426 723 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 ITGB3BPQ13352 177 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms