RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MAMDC4Q6UXC1 1216 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 JMYQ8N9B5 988 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 CHAMP1Q96JM3 812 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 FAM20AQ96MK3 541 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 PURBQ96QR8 312 aaKnown RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 MPHOSPH6Q99547 160 aaKnown RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 MXRA8Q9BRK3 442 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 FTOQ9C0B1 505 aaKnown RBP eCLIP9.06□□□□□ -0.96
COPS3-215ENST00000578317 KCNMB3Q9NPA1 279 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 JADE2Q9NQC1 790 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 DNAAF2Q9NVR5 837 aaKnown RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 SLC5A4Q9NY91 659 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 DDX25Q9UHL0 483 aaKnown RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 DOLKQ9UPQ8 538 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 SRPRBQ9Y5M8 271 aaKnown RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 ASB14A6NK59 587 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 TDP2O95551 362 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 TBC1D8O95759 1140 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 ITGB5P18084 799 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 MCM7P33993 719 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 ZNF76P36508 570 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 ALDH5A1P51649 535 aaPredicted RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 CLDN10P78369 228 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 SETQ01105 290 aaPredicted RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 CEBPZQ03701 1054 aaKnown RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 TRIM32Q13049 653 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 PDIA5Q14554 519 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 STXBP2Q15833 593 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 WDR78Q5VTH9 848 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 ADALQ6DHV7 355 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 SH3RF1Q7Z6J0 888 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 SOCS4Q8WXH5 440 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 FERMT2Q96AC1 680 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 LENG9Q96B70 501 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 FGD4Q96M96 766 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 INPP4AQ96PE3 977 aaPredicted RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 ASTN1O14525 1302 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 PARP14Q460N5 1801 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 A0A1W2PQ27 194 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 A0A1W2PQ64 194 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 A0A1W2PQD8 194 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 GPR25O00155 361 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 GNRH1P01148 92 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 IGHA2P01877 340 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 PGK2P07205 417 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 TGFB3P10600 412 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 PTMSP20962 102 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 ICAM3P32942 547 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 PSMC4P43686 418 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 FCGRTP55899 365 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 SH3BP2P78314 561 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 ARHGEF6Q15052 776 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 AXDND1Q5T1B0 1012 aaPredicted RBP9.05□□□□□ -0.96
COPS3-215ENST00000578317 LIAT1Q6ZQX7 453 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 DPP9Q86TI2 863 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 IL31RAQ8NI17 732 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 CYP2W1Q8TAV3 490 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 ETNPPLQ8TBG4 499 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 FOXJ1Q92949 421 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 GPRASP2Q96D09 838 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 CDHR1Q96JP9 859 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 TMEM60Q9H2L4 133 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 LMBRD1Q9NUN5 540 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 PCDHA7Q9UN72 937 aa9.05□□□□□ -0.96
COPS3-215ENST00000578317 SPATA31C2B4DYI2 1134 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 TNPO2O14787 897 aaKnown RBP9.04□□□□□ -0.96
COPS3-215ENST00000578317 FIBPO43427 364 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 SLC37A4O43826 429 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 CUTAO60888 179 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 PRPF40AO75400 957 aaKnown RBP9.04□□□□□ -0.96
COPS3-215ENST00000578317 RGS20O76081 388 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 OR52Z1P0C646 297 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 CTGFP29279 349 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 UBE2HP62256 183 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 SKOR1P84550 965 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 KIF22Q14807 665 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 CALCRLQ16602 461 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 GNPTABQ3T906 1256 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 PRR16Q569H4 304 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 OLFML2BQ68BL8 750 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 KCNV1Q6PIU1 500 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 DTHD1Q6ZMT9 781 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 NLRX1Q86UT6 975 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
COPS3-215ENST00000578317 HAS1Q92839 578 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 TRIM47Q96LD4 638 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 AK8Q96MA6 479 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 SENP7Q9BQF6 1050 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 KCNH7Q9NS40 1196 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 FBXO2Q9UK22 296 aaPredicted RBP9.04□□□□□ -0.96
COPS3-215ENST00000578317 PCDHA12Q9UN75 941 aa9.04□□□□□ -0.96
COPS3-215ENST00000578317 FAM237AA0A1B0GTK4 181 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 MSH4O15457 936 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 MYCLP12524 364 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms