RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 MARCKSP29966 332 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 SFNP31947 248 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 JAK3P52333 1124 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 PPP2R5CQ13362 524 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 LAMC2Q13753 1193 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 LY6KQ17RY6 165 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 PRAMEF19Q5SWL8 479 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 CELF3Q5SZQ8 465 aaKnown RBP12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 METTL7BQ6UX53 244 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 SMAP1Q8IYB5 467 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 IGSF22Q8N9C0 903 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 MLXIPQ9HAP2 919 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 HMX1Q9NP08 348 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 PKD2L1Q9P0L9 805 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 SLC9A2Q9UBY0 812 aa12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 FBXO2Q9UK22 296 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC8-204ENST00000578252 VWA3AA6NCI4 1184 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 GOLGA6L4A6NEF3 574 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 WDR64B1ANS9 1081 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 SLC26A4O43511 780 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 FARP2O94887 1054 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 RARBP10826 455 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 CNGA1P29973 690 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 TECP42680 631 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 SP2Q02086 613 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 B3GNT9Q6UX72 402 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 CYFIP1Q7L576 1253 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 TRPV1Q8NER1 839 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 ERMNQ8TAM6 284 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 NEK9Q8TD19 979 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 AP5M1Q9H0R1 490 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 SPC25Q9HBM1 224 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 LRWD1Q9UFC0 647 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 SEPT9Q9UHD8 586 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 VAV3Q9UKW4 847 aa12.59□□□□□ -0.39
TRAPPC8-204ENST00000578252 FRMPD3Q5JV73 1810 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 NOP56O00567 594 aaKnown RBP12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 SMPD1P17405 629 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 TXLNAP40222 546 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 ARHGAP1Q07960 439 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 SPIRE1Q08AE8 756 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 TRIM32Q13049 653 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 BRDTQ58F21 947 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 HAUS3Q68CZ6 603 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 ADALQ6DHV7 355 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 NCAPH2Q6IBW4 605 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 MIER3Q7Z3K6 550 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 TLK2Q86UE8 772 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 OR6J1Q8NGC5 347 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 PPTC7Q8NI37 304 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 SH3TC2Q8TF17 1288 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 CHAMP1Q96JM3 812 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 SPATA33Q96N06 139 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 PCDHA7Q9UN72 937 aa12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 GNEQ9Y223 722 aaKnown RBP12.58□□□□□ -0.4
TRAPPC8-204ENST00000578252 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 DDX39AO00148 427 aaKnown RBP12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 DKC1O60832 514 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 PSAPP07602 524 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 PTMSP20962 102 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 MUTP22033 750 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 CCND3P30281 292 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 CPT1AP50416 773 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 ACTR2P61160 394 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 EPHA7Q15375 998 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 IL17AQ16552 155 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 KRT79Q5XKE5 535 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 MIS18BP1Q6P0N0 1132 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 KCTD17Q8N5Z5 321 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 SEPT1Q8WYJ6 367 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 CSRNP2Q9H175 543 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 UPF3AQ9H1J1 476 aaKnown RBP12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 CDHR5Q9HBB8 845 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 GDPD2Q9HCC8 539 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 DISC1Q9NRI5 854 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 DDX20Q9UHI6 824 aaKnown RBP12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 SAMM50Q9Y512 469 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 KDM3AQ9Y4C1 1321 aa12.57□□□□□ -0.4
TRAPPC8-204ENST00000578252 WDR81Q562E7 1941 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 LOXHD1Q8IVV2 1947 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 CHMP2AO43633 222 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 ATG7O95352 703 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 CCNE2O96020 404 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 UBA7P41226 1012 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 GJA9P57773 515 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 NKX3-2P78367 333 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 FAM160B1Q5W0V3 765 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 COPS5Q92905 334 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms