RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 C1orf186Q6ZWK4 172 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 CEP63Q96MT8 703 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 ERGIC2Q96RQ1 377 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 WRAP73Q9P2S5 460 aaPredicted RBP30.66■■■□□ 2.5
LIMD2-203ENST00000578067 CAPN11Q9UMQ6 739 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 TTC26A0AVF1 554 aa30.65■■■□□ 2.5
LIMD2-203ENST00000578067 NKRFO15226 690 aaKnown RBP eCLIP30.65■■■□□ 2.5
LIMD2-203ENST00000578067 PPP1R12BO60237 982 aaPredicted RBP30.65■■■□□ 2.5
LIMD2-203ENST00000578067 ITGB3BPQ13352 177 aaPredicted RBP30.65■■■□□ 2.5
LIMD2-203ENST00000578067 SYCP1Q15431 976 aa30.65■■■□□ 2.5
LIMD2-203ENST00000578067 XRRA1Q6P2D8 792 aa30.65■■■□□ 2.5
LIMD2-203ENST00000578067 TMTC1Q8IUR5 882 aa30.65■■■□□ 2.5
LIMD2-203ENST00000578067 LXNQ9BS40 222 aa30.65■■■□□ 2.5
LIMD2-203ENST00000578067 TBC1D22BQ9NU19 505 aa30.65■■■□□ 2.5
LIMD2-203ENST00000578067 GOLGA6L9A6NEM1 432 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 RSPH10B2B2RC85 870 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 ZBTB39O15060 712 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 RSPH10BP0C881 870 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 GAP43P17677 238 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 MTF1Q14872 753 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 PPP4R3CPQ6ZMV5 832 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 EPM2AIP1Q7L775 607 aaPredicted RBP30.64■■■□□ 2.5
LIMD2-203ENST00000578067 RETREG2Q8NC44 543 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 KIF18AQ8NI77 898 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 TEX13BQ9BXU2 312 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 NDST4Q9H3R1 872 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 LUC7L2Q9Y383 392 aaKnown RBP30.64■■■□□ 2.5
LIMD2-203ENST00000578067 CASP5P51878 434 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 RAD9BQ6WBX8 426 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 PURBQ96QR8 312 aaKnown RBP30.64■■■□□ 2.5
LIMD2-203ENST00000578067 CSADQ9Y600 493 aa30.64■■■□□ 2.5
LIMD2-203ENST00000578067 COL11A1P12107 1806 aaPredicted RBP30.64■■■□□ 2.5
LIMD2-203ENST00000578067 GTF2F1P35269 517 aaKnown RBP eCLIP30.63■■■□□ 2.49
LIMD2-203ENST00000578067 BANK1Q8NDB2 785 aa30.63■■■□□ 2.49
LIMD2-203ENST00000578067 SPDYE16A6NNV3 312 aaPredicted RBP30.63■■■□□ 2.49
LIMD2-203ENST00000578067 EDRF1Q3B7T1 1238 aa30.63■■■□□ 2.49
LIMD2-203ENST00000578067 OR8K1Q8NGG5 319 aa30.63■■■□□ 2.49
LIMD2-203ENST00000578067 KCND2Q9NZV8 630 aa30.63■■■□□ 2.49
LIMD2-203ENST00000578067 GNA14O95837 355 aa30.62■■■□□ 2.49
LIMD2-203ENST00000578067 P4HBP07237 508 aaKnown RBP30.62■■■□□ 2.49
LIMD2-203ENST00000578067 CYP26C1Q6V0L0 522 aa30.62■■■□□ 2.49
LIMD2-203ENST00000578067 ZC3H3Q8IXZ2 948 aaKnown RBP30.62■■■□□ 2.49
LIMD2-203ENST00000578067 MRPL44Q9H9J2 332 aaKnown RBP30.62■■■□□ 2.49
LIMD2-203ENST00000578067 OLFML3Q9NRN5 406 aa30.62■■■□□ 2.49
LIMD2-203ENST00000578067 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.62■■■□□ 2.49
LIMD2-203ENST00000578067 FAM13AO94988 1023 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 CCDC175P0C221 793 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 KNOP1Q1ED39 458 aaKnown RBP30.61■■■□□ 2.49
LIMD2-203ENST00000578067 PCMTD1Q96MG8 357 aaPredicted RBP30.61■■■□□ 2.49
LIMD2-203ENST00000578067 DNAJC7Q99615 494 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 DESI2Q9BSY9 194 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 TTYH3Q9C0H2 523 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 RASSF10A6NK89 507 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 TRIM21P19474 475 aaKnown RBP30.61■■■□□ 2.49
LIMD2-203ENST00000578067 CCND2P30279 289 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 CCDC40Q4G0X9 1142 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 FIGNQ5HY92 759 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 MAF1Q9H063 256 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 ACAD9Q9H845 621 aa30.61■■■□□ 2.49
LIMD2-203ENST00000578067 MYBP10242 640 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 KLK7P49862 253 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 BMT2Q1RMZ1 405 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 SYT10Q6XYQ8 523 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 VSIG10LQ86VR7 867 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 IQCDQ96DY2 449 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 ZSWIM4Q9H7M6 989 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 TRAF3IP3Q9Y228 551 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 ADGRG1Q9Y653 693 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 WDR90Q96KV7 1748 aa30.6■■■□□ 2.49
LIMD2-203ENST00000578067 DYNC1I1O14576 645 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 IREB2P48200 963 aaKnown RBP30.59■■■□□ 2.49
LIMD2-203ENST00000578067 ETF1P62495 437 aaKnown RBP30.59■■■□□ 2.49
LIMD2-203ENST00000578067 ERVK-24P63145 666 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 DPY19L2Q6NUT2 758 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 POLD4Q9HCU8 107 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 SAMM50Q9Y512 469 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 TESPA1A2RU30 521 aaPredicted RBP30.59■■■□□ 2.49
LIMD2-203ENST00000578067 NR3C2P08235 984 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 HOXD13P35453 343 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 MARSP56192 900 aaKnown RBP30.59■■■□□ 2.49
LIMD2-203ENST00000578067 PLS1Q14651 629 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 TRIM65Q6PJ69 517 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 NSUN6Q8TEA1 469 aaKnown RBP30.59■■■□□ 2.49
LIMD2-203ENST00000578067 ODF2LQ9ULJ1 636 aa30.59■■■□□ 2.49
LIMD2-203ENST00000578067 ARHGEF35A5YM69 484 aa30.58■■■□□ 2.49
LIMD2-203ENST00000578067 SFI1A8K8P3 1242 aa30.58■■■□□ 2.49
LIMD2-203ENST00000578067 PRPF6O94906 941 aaKnown RBP30.58■■■□□ 2.49
LIMD2-203ENST00000578067 GCNT3O95395 438 aa30.58■■■□□ 2.49
LIMD2-203ENST00000578067 ADAM9Q13443 819 aa30.58■■■□□ 2.49
LIMD2-203ENST00000578067 TSR1Q2NL82 804 aaKnown RBP30.58■■■□□ 2.49
LIMD2-203ENST00000578067 MYCT1Q8N699 235 aa30.58■■■□□ 2.49
LIMD2-203ENST00000578067 PARVGQ9HBI0 331 aa30.58■■■□□ 2.49
LIMD2-203ENST00000578067 PDXKO00764 312 aa30.57■■■□□ 2.49
LIMD2-203ENST00000578067 CNKSR2Q8WXI2 1034 aa30.57■■■□□ 2.49
LIMD2-203ENST00000578067 BCAS3Q9H6U6 928 aa30.57■■■□□ 2.49
LIMD2-203ENST00000578067 CYP39A1Q9NYL5 469 aa30.57■■■□□ 2.49
LIMD2-203ENST00000578067 SEL1LQ9UBV2 794 aa30.57■■■□□ 2.49
LIMD2-203ENST00000578067 PAPPA2Q9BXP8 1791 aa30.57■■■□□ 2.48
LIMD2-203ENST00000578067 A0A1W2PQJ5 194 aa30.57■■■□□ 2.48
LIMD2-203ENST00000578067 CETN3O15182 167 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms