RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
CRLF3-202ENST00000577725 TIMP1P01033 207 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 CYP3A7P24462 503 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 CIITAP33076 1130 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 LONP1P36776 959 aaKnown RBP11.33□□□□□ -0.6
CRLF3-202ENST00000577725 PRPHP41219 470 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 PGM5Q15124 567 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
CRLF3-202ENST00000577725 Q4G0T1 1027 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 PSRC1Q6PGN9 363 aaPredicted RBP11.33□□□□□ -0.6
CRLF3-202ENST00000577725 MOXD1Q6UVY6 613 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 C16orf59Q7L2K0 433 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 PLA2G4DQ86XP0 818 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 ANKRD35Q8N283 1001 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 TRPV1Q8NER1 839 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 DHX58Q96C10 678 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 PLIN2Q99541 437 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 NAP1L4Q99733 375 aaKnown RBP11.33□□□□□ -0.6
CRLF3-202ENST00000577725 PORCNQ9H237 461 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 YBX2Q9Y2T7 364 aaKnown RBP11.33□□□□□ -0.6
CRLF3-202ENST00000577725 FRMPD4Q14CM0 1322 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 ZFHX4Q86UP3 3567 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 A0A087WWV3 80 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 POTEMA6NI47 508 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 LAD1O00515 517 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
CRLF3-202ENST00000577725 PGK2P07205 417 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 ARP10275 920 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 CYBAP13498 195 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 CYP2C19P33261 490 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 PTPN5P54829 565 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 KARSQ15046 597 aaKnown RBP11.32□□□□□ -0.6
CRLF3-202ENST00000577725 LRRC41Q15345 812 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 LONRF3Q496Y0 759 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 ETNPPLQ8TBG4 499 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 MFSD14AQ96MC6 490 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 MMP19Q99542 508 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 TNMDQ9H2S6 317 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 KCNMB3Q9NPA1 279 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 ASTN1O14525 1302 aa11.32□□□□□ -0.6
CRLF3-202ENST00000577725 C5orf42Q9H799 3197 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 DCDC2CA8MYV0 355 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 SLC25A27O95847 323 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 HOXC6P09630 235 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 ITGB5P18084 799 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 SSTR3P32745 418 aaPredicted RBP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 MRPS9P82933 396 aaKnown RBP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 TMEM266Q2M3C6 531 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 CEP55Q53EZ4 464 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 ZNF365Q70YC5 407 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 CABP7Q86V35 215 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 GAS2L3Q86XJ1 694 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 TEX2Q8IWB9 1127 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 MXRA8Q9BRK3 442 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 MMTAG2Q9BU76 263 aaKnown RBP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 WDR11Q9BZH6 1224 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 MTIF3Q9H2K0 278 aaKnown RBP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 TTC12Q9H892 705 aaPredicted RBP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 MAP3K20Q9NYL2 800 aaKnown RBP11.31□□□□□ -0.6
CRLF3-202ENST00000577725 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 UBIAD1Q9Y5Z9 338 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
CRLF3-202ENST00000577725 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 SLC15A5A6NIM6 579 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 DDX39AO00148 427 aaKnown RBP11.3□□□□□ -0.6
CRLF3-202ENST00000577725 SEPT4O43236 478 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 DCXO43602 365 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 ACTN4O43707 911 aaKnown RBP11.3□□□□□ -0.6
CRLF3-202ENST00000577725 KRT37O76014 449 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 NR3C2P08235 984 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 CCND2P30279 289 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 ZNF445P59923 1031 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 PCNX4Q63HM2 1172 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 NCAPH2Q6IBW4 605 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 KRBA2Q6ZNG9 492 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 ANKRD33Q7Z3H0 272 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 FAM178BQ8IXR5 827 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 IGSF22Q8N9C0 903 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 CNNM3Q8NE01 707 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 LRRC15Q8TF66 581 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 SDF4Q9BRK5 362 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 MCM3APO60318 1980 aa11.3□□□□□ -0.6
CRLF3-202ENST00000577725 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms