RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 NUCB2P80303 420 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 PTGDRQ13258 359 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 KIAA0753Q2KHM9 967 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 ATP6V0A1Q93050 837 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 UNC45AQ9H3U1 944 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 VAV3Q9UKW4 847 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 SAMM50Q9Y512 469 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
RARA-208ENST00000577646 HBP1O60381 514 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 P4HBP07237 508 aaKnown RBP13.92□□□□□ -0.18
RARA-208ENST00000577646 PTGS1P23219 599 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 TXKP42681 527 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 ATP2C1P98194 919 aaPredicted RBP13.92□□□□□ -0.18
RARA-208ENST00000577646 SP4Q02446 784 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 SPIRE1Q08AE8 756 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
RARA-208ENST00000577646 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 DTHD1Q6ZMT9 781 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 ERMNQ8TAM6 284 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
RARA-208ENST00000577646 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 SCN10AQ9Y5Y9 1956 aa13.92□□□□□ -0.18
RARA-208ENST00000577646 GRIN2DO15399 1336 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 DDX39AO00148 427 aaKnown RBP13.91□□□□□ -0.18
RARA-208ENST00000577646 BRD1O95696 1058 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 F13A1P00488 732 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 ZNF286BP0CG31 522 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
RARA-208ENST00000577646 HOXC8P31273 242 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
RARA-208ENST00000577646 RTP1P59025 263 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 PSMC5P62195 406 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 LRRC26Q2I0M4 334 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 PDXDC2PQ6P474 469 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 ZNF710Q8N1W2 664 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 AK8Q96MA6 479 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 PCYT2Q99447 389 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 TMEM60Q9H2L4 133 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 GTF2IRD1Q9UHL9 959 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 CFAP45Q9UL16 551 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
RARA-208ENST00000577646 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
RARA-208ENST00000577646 COL1A2P08123 1366 aa13.91□□□□□ -0.18
RARA-208ENST00000577646 IGSF9BQ9UPX0 1349 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 WNT7AO00755 349 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 SORBS3O60504 671 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 LYPLA2O95372 231 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 CD4P01730 458 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
RARA-208ENST00000577646 TLE2Q04725 743 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.18
RARA-208ENST00000577646 CCDC60Q8IWA6 550 aaPredicted RBP13.9□□□□□ -0.18
RARA-208ENST00000577646 FAM126BQ8IXS8 530 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 CCDC155Q8N6L0 562 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 IGSF22Q8N9C0 903 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 SPRYD3Q8NCJ5 442 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 HSD17B14Q9BPX1 270 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 POLR3CQ9BUI4 534 aaPredicted RBP13.9□□□□□ -0.18
RARA-208ENST00000577646 ZSWIM4Q9H7M6 989 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 TUFT1Q9NNX1 390 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 PRKAG2Q9UGJ0 569 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 TRIOBPQ9H2D6 2365 aa13.9□□□□□ -0.18
RARA-208ENST00000577646 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 POTEB3A0JP26 581 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 CAND2O75155 1236 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
RARA-208ENST00000577646 CLTBP09497 229 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 SMIM10L2AP0DMW4 78 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 SMIM10L2BP0DMW5 78 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 PSMC6P62333 389 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 SLC39A14Q15043 492 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 SF3A1Q15459 793 aaKnown RBP13.89□□□□□ -0.19
RARA-208ENST00000577646 TRIM60Q495X7 471 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 HAUS3Q68CZ6 603 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 POTEBQ6S5H4 581 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 OTUD6AQ7L8S5 288 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 NIFKQ9BYG3 293 aaKnown RBP13.89□□□□□ -0.19
RARA-208ENST00000577646 RNPEPQ9H4A4 650 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 HDAC6Q9UBN7 1215 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 ATP11BQ9Y2G3 1177 aa13.89□□□□□ -0.19
RARA-208ENST00000577646 KIAA0355O15063 1070 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 MAGEB2O15479 319 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 CHMP2AO43633 222 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 YEATS4O95619 227 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 SYN1P17600 705 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 RPA1P27694 616 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 DDIT3P35638 169 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms