RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GRM7Q14831 915 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 MRGPREQ86SM8 312 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 TRIM48Q8IWZ4 208 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 TMEM87AQ8NBN3 555 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 KLHL6Q8WZ60 621 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 CFHR4Q92496 578 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 FERD3LQ96RJ6 166 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 NELFAQ9H3P2 528 aa4.38□□□□□ -1.71
TOP2A-202ENST00000577541 ARHGAP6O43182 974 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 MAFKO60675 156 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 PTGS2P35354 604 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 GRIN1Q05586 938 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 TOP3AQ13472 1001 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-202ENST00000577541 VRK3Q8IV63 474 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 D2HGDHQ8N465 521 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 RBBP8NLQ8NC74 664 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-202ENST00000577541 CLEC4DQ8WXI8 215 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 DIO2Q92813 273 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 HAS1Q92839 578 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 SCYL1Q96KG9 808 aa4.37□□□□□ -1.71
TOP2A-202ENST00000577541 ENO2P09104 434 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-202ENST00000577541 SLC7A5Q01650 507 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 PFKPQ01813 784 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 FBXW10Q5XX13 1052 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 E4F1Q66K89 784 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-202ENST00000577541 METTL16Q86W50 562 aaKnown RBP4.36□□□□□ -1.71
TOP2A-202ENST00000577541 KIAA0825Q8IV33 1275 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 RBM12BQ8IXT5 1001 aaKnown RBP4.36□□□□□ -1.71
TOP2A-202ENST00000577541 SPON2Q9BUD6 331 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 LGR4Q9BXB1 951 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 CYP26B1Q9NR63 512 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 PPT2Q9UMR5 302 aa4.36□□□□□ -1.71
TOP2A-202ENST00000577541 ESYT3A0FGR9 886 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 SCAMP3O14828 347 aaKnown RBP4.35□□□□□ -1.71
TOP2A-202ENST00000577541 IKBKBO14920 756 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 PDE6AP16499 860 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 RCBTB1Q8NDN9 531 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 TACO1Q9BSH4 297 aaKnown RBP4.35□□□□□ -1.71
TOP2A-202ENST00000577541 EPB41L1Q9H4G0 881 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 PHAXQ9H814 394 aaKnown RBP4.35□□□□□ -1.71
TOP2A-202ENST00000577541 DDX41Q9UJV9 622 aaKnown RBP4.35□□□□□ -1.71
TOP2A-202ENST00000577541 EMC9Q9Y3B6 208 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 SLC12A7Q9Y666 1083 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 COX11Q9Y6N1 276 aa4.35□□□□□ -1.71
TOP2A-202ENST00000577541 LCP1P13796 627 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 RACK1P63244 317 aaKnown RBP4.34□□□□□ -1.71
TOP2A-202ENST00000577541 LSAMPQ13449 338 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 COL9A2Q14055 689 aaPredicted RBP4.34□□□□□ -1.71
TOP2A-202ENST00000577541 CYP4F22Q6NT55 531 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 POMZP3Q6PJE2 187 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 OLFML1Q6UWY5 402 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 GPR135Q8IZ08 494 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 CRACR2BQ8N4Y2 399 aaPredicted RBP4.34□□□□□ -1.71
TOP2A-202ENST00000577541 RASGRP4Q8TDF6 673 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 MICAL1Q8TDZ2 1067 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 CHAMP1Q96JM3 812 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 SPATA32Q96LK8 384 aa4.34□□□□□ -1.71
TOP2A-202ENST00000577541 COL11A2P13942 1736 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-202ENST00000577541 FAHP16930 419 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 GPR162Q16538 588 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 ZNF394Q53GI3 561 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 GTF2IRD2BQ6EKJ0 949 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 ZNF662Q6ZS27 426 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 GTF2IRD2Q86UP8 949 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 PDGFDQ9GZP0 370 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-202ENST00000577541 PRDM13Q9H4Q3 707 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 SYNPO2LQ9H987 977 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 CLDND1Q9NY35 253 aa4.33□□□□□ -1.72
TOP2A-202ENST00000577541 KRIT1O00522 736 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 SLC27A2O14975 620 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 KIAA0355O15063 1070 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 ETV4P43268 484 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 MAPK7Q13164 816 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 KCNAB2Q13303 367 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 CD276Q5ZPR3 534 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 USP30Q70CQ3 517 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 RD3Q7Z3Z2 195 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 KREMEN2Q8NCW0 462 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 BVESQ8NE79 360 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 TMEM176AQ96HP8 235 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 NKX2-4Q9H2Z4 354 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 CDIP1Q9H305 208 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 PCDHA2Q9Y5H9 948 aa4.32□□□□□ -1.72
TOP2A-202ENST00000577541 ANKRD34BA5PLL1 514 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 ZNF839A8K0R7 811 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 TRAF5O00463 557 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 MEFVO15553 781 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 GJA8P48165 433 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 SOX9P48436 509 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 CLK3P49761 638 aaKnown RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 CNGB1Q14028 1251 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 TOB2Q14106 344 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 PAN2Q504Q3 1202 aaKnown RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 LARP4Q71RC2 724 aaKnown RBP eCLIP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 HDGFL2Q7Z4V5 671 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 ZNF654Q8IZM8 581 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 ANKRD35Q8N283 1001 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 C9orf106Q8NAJ2 232 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms