RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 GRK2P25098 689 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 LTKP29376 864 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 GRK3P35626 688 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 CRY1Q16526 586 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 TMEM240Q5SV17 173 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 ADGRF1Q5T601 910 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 HHIPL2Q6UWX4 724 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 RNF111Q6ZNA4 994 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 NXPE1Q8N323 547 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 SAMD3Q8N6K7 520 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 C2orf69Q8N8R5 385 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 ANKS4BQ8N8V4 417 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 COG1Q8WTW3 980 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 GPR101Q96P66 508 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 RPS6KC1Q96S38 1066 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 TRIM8Q9BZR9 551 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 ARNT2Q9HBZ2 717 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 THG1LQ9NWX6 298 aaKnown RBP6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 CLEC1BQ9P126 229 aa6.07□□□□□ -1.44
TRAPPC8-203ENST00000577474 PTPDC1A2A3K4 754 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 CCDC66A2RUB6 948 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 HRKO00198 91 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 EFEMP2O95967 443 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 GSTM1P09488 218 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 SRGAP2CP0DJJ0 459 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 ZSCAN20P17040 1043 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 RECQLP46063 649 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 ID4P47928 161 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 MECP2P51608 486 aaKnown RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 KLF1Q13351 362 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 BRD3Q15059 726 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 LRRC41Q15345 812 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 PTPN21Q16825 1174 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 LONRF3Q496Y0 759 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 CNKSR3Q6P9H4 555 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 HDGFL2Q7Z4V5 671 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 JPH3Q8WXH2 748 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 LINC01599Q8WXQ3 324 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 SLC5A5Q92911 643 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 SYTL4Q96C24 671 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 GPR20Q99678 358 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 RTFDC1Q9BY42 306 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 PRDM11Q9NQV5 511 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 ANKRD6Q9Y2G4 727 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 GIT1Q9Y2X7 761 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 COQ6Q9Y2Z9 468 aa6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 LUC7L2Q9Y383 392 aaKnown RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 TIMM13Q9Y5L4 95 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC8-203ENST00000577474 TNKSO95271 1327 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 SHISA3A0PJX4 238 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 H7C1D1 291 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 FGF10O15520 208 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 PRICKLE3O43900 615 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 SYPP08247 313 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 MYBL2P10244 700 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 ATP2A2P16615 1042 aaKnown RBP6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 VIPR1P32241 457 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 DNM2P50570 870 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 RPL11P62913 178 aaKnown RBP6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 LSAMPQ13449 338 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 ZNF174Q15697 407 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 DDB1Q16531 1140 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 MAP9Q49MG5 647 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 PPP4R4Q6NUP7 873 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 OTOP1Q7RTM1 612 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 OVCH1Q7RTY7 1134 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 NLRX1Q86UT6 975 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 DGKHQ86XP1 1220 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 FAM129CQ86XR2 697 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 CCDC103Q8IW40 242 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 NAT16Q8N8M0 369 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 RCBTB1Q8NDN9 531 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 CHTF18Q8WVB6 975 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 FUBP3Q96I24 572 aaKnown RBP eCLIP6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 PTCHD1Q96NR3 888 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 NUP88Q99567 741 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 BOCQ9BWV1 1114 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 TMEFF2Q9UIK5 374 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 TCFL5Q9UL49 500 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 MINPP1Q9UNW1 487 aa6.05□□□□□ -1.44
TRAPPC8-203ENST00000577474 H7BY64 318 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 NPHS1O60500 1241 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 MSCO60682 206 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 ERVK-21P61565 698 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 LACTBP83111 547 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 PURAQ00577 322 aaKnown RBP6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 TEKQ02763 1124 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 DUSP4Q13115 394 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 GTF2H3Q13889 308 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 RTP5Q14D33 572 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 INAVAQ3KP66 663 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 MINDY4Q4G0A6 757 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 GPR158Q5T848 1215 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 C14orf80Q86SX3 495 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 LINC01356Q8N9X3 169 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 TP53I13Q8NBR0 393 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 RHOBTB2Q9BYZ6 727 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 IPPKQ9H8X2 491 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 CATSPERZQ9NTU4 200 aa6.04□□□□□ -1.44
TRAPPC8-203ENST00000577474 SPTLC3Q9NUV7 552 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms