RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 C6orf50Q9HD87 102 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 PKD2L1Q9P0L9 805 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 TUBE1Q9UJT0 475 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 COG5Q9UP83 839 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 TTC3P53804 2025 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 TRANK1O15050 2925 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 LCHNA4D1U4 455 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 MBLAC1A4D2B0 266 aaPredicted RBP17.03■□□□□ 0.32
MKS1-205ENST00000577315 LINC01553A4QN01 128 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 EPOPA6NHQ4 379 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 MEIS1O00470 390 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 SCG2P13521 617 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 GNA11P29992 359 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 ADD1P35611 737 aaKnown RBP17.03■□□□□ 0.32
MKS1-205ENST00000577315 SLC26A2P50443 739 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 HTRA4P83105 476 aaPredicted RBP17.03■□□□□ 0.32
MKS1-205ENST00000577315 AKAP17AQ02040 695 aaKnown RBP17.03■□□□□ 0.32
MKS1-205ENST00000577315 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 GRB10Q13322 594 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 SKIV2LQ15477 1246 aaKnown RBP17.03■□□□□ 0.32
MKS1-205ENST00000577315 TMCO2Q7Z6W1 182 aaPredicted RBP17.03■□□□□ 0.32
MKS1-205ENST00000577315 TOP1MTQ969P6 601 aa17.03■□□□□ 0.32
MKS1-205ENST00000577315 IFIH1Q9BYX4 1025 aaKnown RBP17.03■□□□□ 0.32
MKS1-205ENST00000577315 COL4A6Q14031 1691 aa17.02■□□□□ 0.32
MKS1-205ENST00000577315 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
MKS1-205ENST00000577315 RPS6KB1P23443 525 aa17.02■□□□□ 0.32
MKS1-205ENST00000577315 MARK3P27448 753 aa17.02■□□□□ 0.32
MKS1-205ENST00000577315 STAT5BP51692 787 aa17.02■□□□□ 0.32
MKS1-205ENST00000577315 FAM117BQ6P1L5 589 aa17.02■□□□□ 0.32
MKS1-205ENST00000577315 PGBD1Q96JS3 809 aa17.02■□□□□ 0.32
MKS1-205ENST00000577315 ZMYND12Q9H0C1 365 aa17.02■□□□□ 0.32
MKS1-205ENST00000577315 AGO4Q9HCK5 861 aaKnown RBP17.02■□□□□ 0.32
MKS1-205ENST00000577315 BRWD1Q9NSI6 2320 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 LPXNO60711 386 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 ATG7O95352 703 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 CHRNA1P02708 482 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 CYP3A4P08684 503 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 ARP10275 920 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 CPA1P15085 419 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 ACTR2P61160 394 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 FAM43BQ6ZT52 329 aaPredicted RBP17.01■□□□□ 0.31
MKS1-205ENST00000577315 CYP2W1Q8TAV3 490 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
MKS1-205ENST00000577315 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
MKS1-205ENST00000577315 TMEM260Q9NX78 707 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 SQORQ9Y6N5 450 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 VCANP13611 3396 aa17.01■□□□□ 0.31
MKS1-205ENST00000577315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17■□□□□ 0.31
MKS1-205ENST00000577315 M0QZ92 97 aa17■□□□□ 0.31
MKS1-205ENST00000577315 INSRRP14616 1297 aa17■□□□□ 0.31
MKS1-205ENST00000577315 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
MKS1-205ENST00000577315 MGAT3Q09327 533 aa17■□□□□ 0.31
MKS1-205ENST00000577315 MARCH8Q5T0T0 291 aa17■□□□□ 0.31
MKS1-205ENST00000577315 IER5Q5VY09 327 aa17■□□□□ 0.31
MKS1-205ENST00000577315 JAKMIP3Q5VZ66 844 aa17■□□□□ 0.31
MKS1-205ENST00000577315 FAM160B1Q5W0V3 765 aa17■□□□□ 0.31
MKS1-205ENST00000577315 RUFY4Q6ZNE9 571 aa17■□□□□ 0.31
MKS1-205ENST00000577315 PLA2G4DQ86XP0 818 aa17■□□□□ 0.31
MKS1-205ENST00000577315 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
MKS1-205ENST00000577315 CCDC148Q8NFR7 591 aa17■□□□□ 0.31
MKS1-205ENST00000577315 DNAJB3Q8WWF6 145 aa17■□□□□ 0.31
MKS1-205ENST00000577315 YME1L1Q96TA2 773 aa17■□□□□ 0.31
MKS1-205ENST00000577315 PCYT2Q99447 389 aa17■□□□□ 0.31
MKS1-205ENST00000577315 SUGCTQ9HAC7 445 aa17■□□□□ 0.31
MKS1-205ENST00000577315 TRPC6Q9Y210 931 aa17■□□□□ 0.31
MKS1-205ENST00000577315 IGKV6D-21A0A0A0MT36 114 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 TNFRSF10AO00220 468 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 NEFLP07196 543 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 EVCP57679 992 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 IGBP1P78318 339 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 ITGB3BPQ13352 177 aaPredicted RBP16.99■□□□□ 0.31
MKS1-205ENST00000577315 PLCB4Q15147 1175 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 NME8Q8N427 588 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 FBXO22Q8NEZ5 403 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 GDPD5Q8WTR4 605 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 CRYGNQ8WXF5 182 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 TBC1D22BQ9NU19 505 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 TCEAL9Q9UHQ7 104 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
MKS1-205ENST00000577315 POTEB3A0JP26 581 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 HBP1O60381 514 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 UPP2O95045 317 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 GHRP10912 638 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 IFNAR1P17181 557 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 MRPS6P82932 125 aaKnown RBP16.98■□□□□ 0.31
MKS1-205ENST00000577315 PKN1Q16512 942 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 FBXO47Q5MNV8 452 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 MIS18BP1Q6P0N0 1132 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 POTEBQ6S5H4 581 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 TSHZ1Q6ZSZ6 1077 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 SPRED2Q7Z698 418 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 ADAMTS19Q8TE59 1207 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 HLA-CQ95604 372 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 FTHL17Q9BXU8 183 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 MTUS1Q9ULD2 1270 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 CDY2AQ9Y6F7 541 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 COL1A2P08123 1366 aa16.98■□□□□ 0.31
MKS1-205ENST00000577315 SMIM35A0A1B0GVV1 85 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms