RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SIRPGQ9P1W8 387 aa7.46□□□□□ -1.22
SMCHD1-202ENST00000577300 ARVCFO00192 962 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 PTPN1P18031 435 aaKnown RBP7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 SELENOPP49908 381 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 LONRF2Q1L5Z9 754 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 FAM209AQ5JX71 171 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 FOXB2Q5VYV0 432 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 ARHGAP36Q6ZRI8 547 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 C16orf59Q7L2K0 433 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 PCDH19Q8TAB3 1148 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 SH3RF3Q8TEJ3 882 aaPredicted RBP7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 TACO1Q9BSH4 297 aaKnown RBP7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 SEMA4AQ9H3S1 761 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 DEF6Q9H4E7 631 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 PFDN2Q9UHV9 154 aa7.45□□□□□ -1.22
SMCHD1-202ENST00000577300 FAM90A27PA6NNH2 459 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 CUTAO60888 179 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 ZNF623O75123 536 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 ATP2B1P20020 1258 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 GJA4P35212 333 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 GABREP78334 506 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 USP10Q14694 798 aaKnown RBP7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 FIGNQ5HY92 759 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 DPP8Q6V1X1 898 aaPredicted RBP7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 GPR155Q7Z3F1 870 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 SPRED1Q7Z699 444 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 IFNL2Q8IZJ0 200 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 SLC39A2Q9NP94 309 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 TCAF1Q9Y4C2 921 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 PCDHA8Q9Y5H6 950 aa7.44□□□□□ -1.22
SMCHD1-202ENST00000577300 MAN2B1O00754 1011 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 AKAP8O43823 692 aaKnown RBP7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 AMY2AP04746 511 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 AMY2BP19961 511 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 POLD1P28340 1107 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 GUCY1A3Q02108 690 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 R3HDM1Q15032 1099 aaKnown RBP7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 ZNF585AQ6P3V2 769 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 Q8TCH9 128 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 EXOC2Q96KP1 924 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 CARD11Q9BXL7 1154 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 TANGO6Q9C0B7 1094 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 CATSPERZQ9NTU4 200 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 RIC8BQ9NVN3 520 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 ATP23Q9Y6H3 246 aa7.43□□□□□ -1.22
SMCHD1-202ENST00000577300 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 GSTA4O15217 222 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 DIAPH1O60610 1272 aaKnown RBP7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 PYGMP11217 842 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 PDE6AP16499 860 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 TOP3AQ13472 1001 aaPredicted RBP7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 OSTM1Q86WC4 334 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 LMF1Q96S06 567 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 DHRS4Q9BTZ2 278 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 ARHGAP28Q9P2N2 729 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 CBLCQ9ULV8 474 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 TESMINQ9Y4I5 508 aa7.42□□□□□ -1.22
SMCHD1-202ENST00000577300 CCDC85CA6NKD9 419 aa7.41□□□□□ -1.22
SMCHD1-202ENST00000577300 ZNF561-AS1K7EIQ3 104 aa7.41□□□□□ -1.22
SMCHD1-202ENST00000577300 FAM153BP0C7A2 387 aa7.41□□□□□ -1.22
SMCHD1-202ENST00000577300 ZNF888P0CJ79 500 aaPredicted RBP7.41□□□□□ -1.22
SMCHD1-202ENST00000577300 CRY1Q16526 586 aa7.41□□□□□ -1.22
SMCHD1-202ENST00000577300 FAM47CQ5HY64 1035 aa7.41□□□□□ -1.22
SMCHD1-202ENST00000577300 LRP10Q7Z4F1 713 aa7.41□□□□□ -1.22
SMCHD1-202ENST00000577300 MUSKO15146 869 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 C6P13671 934 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 TACR2P21452 398 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 JAM2P57087 298 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 ST5P78524 1137 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 LACTBP83111 547 aaPredicted RBP7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 SERINC3Q13530 473 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 ZNF568Q3ZCX4 644 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 ZC3H12BQ5HYM0 836 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 TCTN3Q6NUS6 607 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 CRIP3Q6Q6R5 217 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 EP400NLQ6ZTU2 488 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 CXXC5Q7LFL8 322 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 PTRH1Q86Y79 214 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 ARMC5Q96C12 935 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 GNRHR2Q96P88 292 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 HIRIP3Q9BW71 556 aaPredicted RBP7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 SRRDQ9UH36 339 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 PTPN22Q9Y2R2 807 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 MRPS23Q9Y3D9 190 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 PCDHA9Q9Y5H5 950 aa7.4□□□□□ -1.22
SMCHD1-202ENST00000577300 KDM2BQ8NHM5 1336 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 ESYT3A0FGR9 886 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 CLASP2O75122 1294 aaKnown RBP7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 C4BPAP04003 597 aaKnown RBP7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 SRGAP2CP0DJJ0 459 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 PTGS1P23219 599 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 AOAHP28039 575 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 ETV4P43268 484 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 HERVK_113P62684 666 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 RASA3Q14644 834 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 ZMAT1Q5H9K5 638 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 PALM2Q8IXS6 379 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 SLC16A11Q8NCK7 471 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms