RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PAN2Q504Q3 1202 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 FBXL6Q8N531 539 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 SMRP1Q8NCR6 262 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 P2RX5Q93086 422 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 SENP2Q9HC62 589 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 USP15Q9Y4E8 981 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 CDY2AQ9Y6F7 541 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 CFAP54Q96N23 3096 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 GSTTP1A0A1W2PQM5 241 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 GLP2RO95838 553 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 TCF7P36402 384 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 IGBP1P78318 339 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 TMEM62Q0P6H9 643 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 PPFIA1Q13136 1202 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 CBX2Q14781 532 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 PKN1Q16512 942 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 MARCH8Q5T0T0 291 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 TAF2Q6P1X5 1199 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 MICAL1Q8TDZ2 1067 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 SENP7Q9BQF6 1050 aa11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 ZFHX2Q9C0A1 2572 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-220ENST00000576940 ZDBF2Q9HCK1 2354 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 GFRA3O60609 400 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 STAM2O75886 525 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 AVPR2P30518 371 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 SIGLEC14Q08ET2 396 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 GRM4Q14833 912 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 GRIK4Q16099 956 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 NAALADL2Q58DX5 795 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 TSHZ1Q6ZSZ6 1077 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 CMTR2Q8IYT2 770 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 ATOH1Q92858 354 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 PPP2R3CQ969Q6 453 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 ASIC4Q96FT7 647 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 PRRX2Q99811 253 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 DSCC1Q9BVC3 393 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 PHF7Q9BWX1 381 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 FAM49AQ9H0Q0 323 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 TLE6Q9H808 572 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 TUBE1Q9UJT0 475 aa11.67□□□□□ -0.54
NPLOC4-220ENST00000576940 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 MBLAC1A4D2B0 266 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 H0Y858 1186 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 MRPS6P82932 125 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 TRAF1Q13077 416 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 NLRX1Q86UT6 975 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 PLEKHM2Q8IWE5 1019 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 VN1R2Q8NFZ6 395 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 SMARCC2Q8TAQ2 1214 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 SEPT1Q8WYJ6 367 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 GLG1Q92896 1179 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 IL25Q9H293 177 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 CNNM2Q9H8M5 875 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 TLR9Q9NR96 1032 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 DIAPH3Q9NSV4 1193 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 PKD2L1Q9P0L9 805 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
NPLOC4-220ENST00000576940 MEIS2O14770 477 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 PDGFBP01127 241 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 INSRRP14616 1297 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 KCNA2P16389 499 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 ERVFC1P60507 584 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 TROAPQ12815 778 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 HDAC1Q13547 482 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 PCNX4Q63HM2 1172 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 NPAS4Q8IUM7 802 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 ERAP1Q9NZ08 941 aa11.65□□□□□ -0.54
NPLOC4-220ENST00000576940 STAG3L1P0CL83 205 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 SCG2P13521 617 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 ITGB5P18084 799 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 TMEM266Q2M3C6 531 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 IER5Q5VY09 327 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 GIMAP8Q8ND71 665 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 ATP8B4Q8TF62 1192 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 TRAPPC12Q8WVT3 735 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 SUSD6Q92537 303 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 PCYT2Q99447 389 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 APOL5Q9BWW9 433 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 FTHL17Q9BXU8 183 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 SMARCAD1Q9H4L7 1026 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 LRFN2Q9ULH4 789 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 TRPV2Q9Y5S1 764 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 KIAA1671Q9BY89 1806 aa11.64□□□□□ -0.55
NPLOC4-220ENST00000576940 KMT2EQ8IZD2 1858 aa11.63□□□□□ -0.55
NPLOC4-220ENST00000576940 LAMA4Q16363 1823 aa11.63□□□□□ -0.55
NPLOC4-220ENST00000576940 PTPRZ1P23471 2315 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-220ENST00000576940 SP100P23497 879 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-220ENST00000576940 NFX1Q12986 1120 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-220ENST00000576940 PAK2Q13177 524 aa11.63□□□□□ -0.55
NPLOC4-220ENST00000576940 PTPN21Q16825 1174 aa11.63□□□□□ -0.55
NPLOC4-220ENST00000576940 DUSP6Q16828 381 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms