RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 UBE2R2Q712K3 238 aaPredicted RBP7.69□□□□□ -1.18
NUP88-213ENST00000576862 WNK4Q96J92 1243 aa7.69□□□□□ -1.18
NUP88-213ENST00000576862 TARS2Q9BW92 718 aaKnown RBP7.69□□□□□ -1.18
NUP88-213ENST00000576862 A0A087X0B3 334 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 SMARCA5O60264 1052 aaPredicted RBP7.68□□□□□ -1.18
NUP88-213ENST00000576862 ENO2P09104 434 aaPredicted RBP7.68□□□□□ -1.18
NUP88-213ENST00000576862 RPL13P26373 211 aaKnown RBP7.68□□□□□ -1.18
NUP88-213ENST00000576862 IRF9Q00978 393 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 PCBP1Q15365 356 aaKnown RBP eCLIP7.68□□□□□ -1.18
NUP88-213ENST00000576862 CNNM4Q6P4Q7 775 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 CARFQ8N187 725 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 CLIC6Q96NY7 704 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 BOCQ9BWV1 1114 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 SLC39A2Q9NP94 309 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 DLL4Q9NR61 685 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 KCNH7Q9NS40 1196 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 B4GALT6Q9UBX8 382 aa7.68□□□□□ -1.18
NUP88-213ENST00000576862 PTPDC1A2A3K4 754 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 PRAMEF25A6NGN4 478 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 RASSF10A6NK89 507 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 DVL2O14641 736 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 KPNA6O60684 536 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 SLURP1P55000 103 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 MLLT6P55198 1093 aaPredicted RBP7.67□□□□□ -1.18
NUP88-213ENST00000576862 HERVK_113P62684 666 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 ARHGAP44Q17R89 818 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 SKIDA1Q1XH10 827 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 CREB3L3Q68CJ9 461 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 PKN3Q6P5Z2 889 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 TTLL7Q6ZT98 887 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 KRTAP1-3Q8IUG1 177 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 MARCH10Q8NA82 808 aaPredicted RBP7.67□□□□□ -1.18
NUP88-213ENST00000576862 NTMQ9P121 344 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 BTBD7Q9P203 1132 aa7.67□□□□□ -1.18
NUP88-213ENST00000576862 IL18BPO95998 194 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 COL6A1P12109 1028 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 ZNF28P17035 718 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 AOAHP28039 575 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 SARSP49591 514 aaKnown RBP7.66□□□□□ -1.18
NUP88-213ENST00000576862 NEK4P51957 841 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 IGDCC4Q8TDY8 1250 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 KCNC2Q96PR1 638 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 SPATA25Q9BR10 227 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 CABP5Q9NP86 173 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 CROTQ9UKG9 612 aa7.66□□□□□ -1.18
NUP88-213ENST00000576862 GSG1L2A8MUP6 293 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 KRT37O76014 449 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 MPIG6BO95866 241 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 MMEP08473 750 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 BMP7P18075 431 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 SDHAP31040 664 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 MC4RP32245 332 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 SEPT7Q16181 437 aaKnown RBP7.65□□□□□ -1.18
NUP88-213ENST00000576862 SKOR2Q2VWA4 1001 aaPredicted RBP7.65□□□□□ -1.18
NUP88-213ENST00000576862 CATSPEREQ5SY80 951 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 EGFLAMQ63HQ2 1017 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 ZCCHC14Q8WYQ9 949 aaKnown RBP7.65□□□□□ -1.18
NUP88-213ENST00000576862 KCND1Q9NSA2 647 aa7.65□□□□□ -1.18
NUP88-213ENST00000576862 ZNF891A8MT65 544 aaPredicted RBP7.64□□□□□ -1.19
NUP88-213ENST00000576862 DDX3XO00571 662 aaKnown RBP eCLIP7.64□□□□□ -1.19
NUP88-213ENST00000576862 PDE8AO60658 829 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 HIP1RO75146 1068 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 F2P00734 622 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 IL13P35225 146 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 GLRBP48167 497 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 DSG1Q02413 1049 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 TMEM132BQ14DG7 1078 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 CC2D1AQ6P1N0 951 aaPredicted RBP7.64□□□□□ -1.19
NUP88-213ENST00000576862 KIF18BQ86Y91 864 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 NXPE1Q8N323 547 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 SYT8Q8NBV8 401 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 ADAMTS17Q8TE56 1095 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 ASB15Q8WXK1 588 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 WRNIP1Q96S55 665 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 LUC7LQ9NQ29 371 aaKnown RBP7.64□□□□□ -1.19
NUP88-213ENST00000576862 ARHGAP20Q9P2F6 1191 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 ZFP69BQ9UJL9 534 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 ADAMTS20P59510 1910 aa7.64□□□□□ -1.19
NUP88-213ENST00000576862 FOXP2O15409 715 aa7.63□□□□□ -1.19
NUP88-213ENST00000576862 MYCLP1P12525 358 aaPredicted RBP7.63□□□□□ -1.19
NUP88-213ENST00000576862 PTGS1P23219 599 aa7.63□□□□□ -1.19
NUP88-213ENST00000576862 ZNF761Q86XN6 746 aaPredicted RBP7.63□□□□□ -1.19
NUP88-213ENST00000576862 THNSL2Q86YJ6 484 aa7.63□□□□□ -1.19
NUP88-213ENST00000576862 PPM1KQ8N3J5 372 aa7.63□□□□□ -1.19
NUP88-213ENST00000576862 STPG3Q8N7X2 389 aa7.63□□□□□ -1.19
NUP88-213ENST00000576862 ARHGAP28Q9P2N2 729 aa7.63□□□□□ -1.19
NUP88-213ENST00000576862 ATP2A2P16615 1042 aaKnown RBP7.62□□□□□ -1.19
NUP88-213ENST00000576862 KCNC1P48547 511 aa7.62□□□□□ -1.19
NUP88-213ENST00000576862 KIF11P52732 1056 aa7.62□□□□□ -1.19
NUP88-213ENST00000576862 PRAMEF18Q5VWM3 479 aa7.62□□□□□ -1.19
NUP88-213ENST00000576862 AHI1Q8N157 1196 aa7.62□□□□□ -1.19
NUP88-213ENST00000576862 TACO1Q9BSH4 297 aaKnown RBP7.62□□□□□ -1.19
NUP88-213ENST00000576862 AMNQ9BXJ7 453 aa7.62□□□□□ -1.19
NUP88-213ENST00000576862 H2AFY2Q9P0M6 372 aaPredicted RBP7.62□□□□□ -1.19
NUP88-213ENST00000576862 CADPSQ9ULU8 1353 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 CYP7B1O75881 506 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 KNG1P01042 644 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 SMAD2Q15796 467 aaKnown RBP7.61□□□□□ -1.19
NUP88-213ENST00000576862 MCTP2Q6DN12 878 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 RNF180Q86T96 592 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms