RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	LRRC8D	Q7L1W4	858 aa		28.65	■■■□□ 2.18
SRRM2-223	ENST00000575701	SLC5A5	Q92911	643 aa		28.65	■■■□□ 2.18
SRRM2-223	ENST00000575701	SETD4	Q9NVD3	440 aa		28.65	■■■□□ 2.18
SRRM2-223	ENST00000575701	SOX1	O00570	391 aa	Predicted RBP	28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	BACH1	O14867	736 aa		28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	FGB	P02675	491 aa		28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	ACR	P10323	421 aa		28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	CKB	P12277	381 aa		28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	ADAM17	P78536	824 aa		28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	TRIM71	Q2Q1W2	868 aa	Known RBP	28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	LETM2	Q2VYF4	491 aa		28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	PPP4R3A	Q6IN85	833 aa		28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	DDX25	Q9UHL0	483 aa	Known RBP	28.64	■■■□□ 2.18
SRRM2-223	ENST00000575701	TRIP12	Q14669	1992 aa	Predicted RBP	28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	TREH	O43280	583 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	GAS7	O60861	476 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	SAFB	Q15424	915 aa	Known RBP eCLIP	28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	LRCH2	Q5VUJ6	765 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	DIS3L2	Q8IYB7	885 aa	Known RBP	28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	FAM184A	Q8NB25	1140 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	HERVK_113	Q902F9	699 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	TNFRSF25	Q93038	417 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	TEKT3	Q9BXF9	490 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	PCDHA10	Q9Y5I2	948 aa		28.63	■■■□□ 2.17
SRRM2-223	ENST00000575701	KAT6A	Q92794	2004 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	RRN3P2	A6NIE6	340 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	WDR64	B1ANS9	1081 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	PSAP	P07602	524 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	NR5A1	Q13285	461 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	GRIK4	Q16099	956 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	RASIP1	Q5U651	963 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	C8orf76	Q96K31	380 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	ZNF302	Q9NR11	478 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	TRPC6	Q9Y210	931 aa		28.62	■■■□□ 2.17
SRRM2-223	ENST00000575701	SFN	P31947	248 aa		28.61	■■■□□ 2.17
SRRM2-223	ENST00000575701	TAF2	Q6P1X5	1199 aa		28.61	■■■□□ 2.17
SRRM2-223	ENST00000575701	CCDC60	Q8IWA6	550 aa	Predicted RBP	28.61	■■■□□ 2.17
SRRM2-223	ENST00000575701	LRCH3	Q96II8	777 aa		28.61	■■■□□ 2.17
SRRM2-223	ENST00000575701	UIMC1	Q96RL1	719 aa		28.61	■■■□□ 2.17
SRRM2-223	ENST00000575701	KIF3A	Q9Y496	699 aa		28.61	■■■□□ 2.17
SRRM2-223	ENST00000575701	SCN5A	Q14524	2016 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	RPLP2	P05387	115 aa	Known RBP	28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	ACTN1	P12814	892 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	THPO	P40225	353 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	JAK3	P52333	1124 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	SMAD3	P84022	425 aa	Known RBP	28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	PLCB4	Q15147	1175 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	PDXDC2P	Q6P474	469 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	DEFB128	Q7Z7B8	93 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	RDM1	Q8NG50	284 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	ETNPPL	Q8TBG4	499 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	WNT8B	Q93098	351 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	FAM20A	Q96MK3	541 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	TUBE1	Q9UJT0	475 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	SAMM50	Q9Y512	469 aa		28.6	■■■□□ 2.17
SRRM2-223	ENST00000575701	POTEB3	A0JP26	581 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	MBLAC1	A4D2B0	266 aa	Predicted RBP	28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	BTBD18	B2RXH4	712 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	PSMD10	O75832	226 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	INSRR	P14616	1297 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	FOSB	P53539	338 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	ZNF618	Q5T7W0	954 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	SWSAP1	Q6NVH7	229 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	POTEB	Q6S5H4	581 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	VWCE	Q96DN2	955 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	TMX3	Q96JJ7	454 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	MAFB	Q9Y5Q3	323 aa	Predicted RBP	28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	LAMA3	Q16787	3333 aa		28.59	■■■□□ 2.17
SRRM2-223	ENST00000575701	TBX3	O15119	743 aa		28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	SLC37A4	O43826	429 aa		28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	HBP1	O60381	514 aa		28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	CCNT1	O60563	726 aa	Known RBP	28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	EARS2	Q5JPH6	523 aa	Known RBP	28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	OTOP2	Q7RTS6	562 aa		28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	RPAIN	Q86UA6	219 aa		28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	ATP8B4	Q8TF62	1192 aa		28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	FTO	Q9C0B1	505 aa	Known RBP eCLIP	28.58	■■■□□ 2.17	6e-9	■□□□□ 9.2
SRRM2-223	ENST00000575701	DISC1	Q9NRI5	854 aa		28.58	■■■□□ 2.17
SRRM2-223	ENST00000575701	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	RSPH10B2	B2RC85	870 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	CXCL10	P02778	98 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	RSPH10B	P0C881	870 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	TRAF7	Q6Q0C0	670 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	RSPH3	Q86UC2	560 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	FBXO18	Q8NFZ0	1043 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	KCNMB3	Q9NPA1	279 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	IGSF9B	Q9UPX0	1349 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	COL1A2	P08123	1366 aa		28.57	■■■□□ 2.16
SRRM2-223	ENST00000575701	MARCH8	Q5T0T0	291 aa		28.56	■■■□□ 2.16
SRRM2-223	ENST00000575701	BBX	Q8WY36	941 aa	Predicted RBP	28.56	■■■□□ 2.16
SRRM2-223	ENST00000575701	FAM167A	Q96KS9	214 aa		28.56	■■■□□ 2.16
SRRM2-223	ENST00000575701	UNC45A	Q9H3U1	944 aa		28.56	■■■□□ 2.16
SRRM2-223	ENST00000575701	MYH9	P35579	1960 aa	Known RBP	28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	FAM205C	A6NFA0	338 aa		28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	BAIAP3	O94812	1187 aa		28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	CD2BP2	O95400	341 aa	Known RBP	28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	IGBP1	P78318	339 aa		28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	B3GNT9	Q6UX72	402 aa		28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	CKAP2L	Q8IYA6	745 aa		28.55	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms