RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.02■□□□□ -03e-12■■□□□ 13.8
RPAIN-216ENST00000575599 RNPEPQ9H4A4 650 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 SMARCAD1Q9H4L7 1026 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 IL23AQ9NPF7 189 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 SETD4Q9NVD3 440 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 ERAP1Q9NZ08 941 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 TRIP12Q14669 1992 aaPredicted RBP15.02□□□□□ -0.01
RPAIN-216ENST00000575599 BACH1O14867 736 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 MSH4O15457 936 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 DHX15O43143 795 aaKnown RBP15.01□□□□□ -0.01
RPAIN-216ENST00000575599 TREHO43280 583 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 LGR5O75473 907 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 PPFIA1Q13136 1202 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 NR5A1Q13285 461 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 PTK7Q13308 1070 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 LETM2Q2VYF4 491 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 KRT40Q6A162 431 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
RPAIN-216ENST00000575599 ZNF365Q70YC5 407 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 C16orf59Q7L2K0 433 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 DEFB128Q7Z7B8 93 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 AFAP1L1Q8TED9 768 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 LMBR1Q8WVP7 490 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 WNT8BQ93098 351 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 GJA10Q969M2 543 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 LLPHQ9BRT6 129 aaKnown RBP15.01□□□□□ -0.01
RPAIN-216ENST00000575599 TBC1D22BQ9NU19 505 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 SCN5AQ14524 2016 aa15.01□□□□□ -0.01
RPAIN-216ENST00000575599 FAM205CA6NFA0 338 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 CD2BP2O95400 341 aaKnown RBP15□□□□□ -0.01
RPAIN-216ENST00000575599 MMP1P03956 469 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 IQCF3P0C7M6 154 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 GNAT1P11488 350 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 HOXC8P31273 242 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 MCM2P49736 904 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 STAT5BP51692 787 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 GUCY1B3Q02153 619 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 TMEM240Q5SV17 173 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 MIS18BP1Q6P0N0 1132 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 LRRC8DQ7L1W4 858 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 NEK8Q86SG6 692 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 DDX25Q9UHL0 483 aaKnown RBP15□□□□□ -0.01
RPAIN-216ENST00000575599 TRPC6Q9Y210 931 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 NRCAMQ92823 1304 aa15□□□□□ -0.01
RPAIN-216ENST00000575599 CHMP2AO43633 222 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 GAS7O60861 476 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 ATG7O95352 703 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 CKBP12277 381 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 SELPP16109 830 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 THPOP40225 353 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 IGBP1P78318 339 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 HMGN5P82970 282 aaKnown RBP14.99□□□□□ -0.01
RPAIN-216ENST00000575599 KRT76Q01546 638 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 GRIK4Q16099 956 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 Q4G0T1 1027 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 EARS2Q5JPH6 523 aaKnown RBP14.99□□□□□ -0.01
RPAIN-216ENST00000575599 LRCH2Q5VUJ6 765 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 FAM160B1Q5W0V3 765 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 ZNF746Q6NUN9 644 aaPredicted RBP14.99□□□□□ -0.01
RPAIN-216ENST00000575599 MOXD1Q6UVY6 613 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 ABHD15Q6UXT9 468 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 OTOP2Q7RTS6 562 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 SERINC5Q86VE9 423 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 CCDC60Q8IWA6 550 aaPredicted RBP14.99□□□□□ -0.01
RPAIN-216ENST00000575599 DIS3L2Q8IYB7 885 aaKnown RBP14.99□□□□□ -0.01
RPAIN-216ENST00000575599 RPUSD2Q8IZ73 545 aaKnown RBP14.99□□□□□ -0.01
RPAIN-216ENST00000575599 FAM184AQ8NB25 1140 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 C8orf76Q96K31 380 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 TEKT3Q9BXF9 490 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 SAMM50Q9Y512 469 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 KAT6AQ92794 2004 aa14.99□□□□□ -0.01
RPAIN-216ENST00000575599 CYP3A7-CYP3A51PA0A087WV96 503 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 BTBD18B2RXH4 712 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 SLC37A4O43826 429 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 CCNT1O60563 726 aaKnown RBP14.98□□□□□ -0.01
RPAIN-216ENST00000575599 FGBP02675 491 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 CYP3A7P24462 503 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 RFC2P35250 354 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 RBL2Q08999 1139 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 PLCB4Q15147 1175 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 TRIM71Q2Q1W2 868 aaKnown RBP14.98□□□□□ -0.01
RPAIN-216ENST00000575599 ZNF618Q5T7W0 954 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 SWSAP1Q6NVH7 229 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 PLPPR4Q7Z2D5 763 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 SMAP1Q8IYB5 467 aaPredicted RBP14.98□□□□□ -0.01
RPAIN-216ENST00000575599 SLC5A5Q92911 643 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 TNFRSF25Q93038 417 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 FTOQ9C0B1 505 aaKnown RBP eCLIP14.98□□□□□ -0.01
RPAIN-216ENST00000575599 ZNF302Q9NR11 478 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 IGKV6D-21A0A0A0MT36 114 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 PSAPP07602 524 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 PFKMP08237 780 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 CTSHP09668 335 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 INSRRP14616 1297 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 SAFBQ15424 915 aaKnown RBP eCLIP14.98□□□□□ -0.01
RPAIN-216ENST00000575599 PDXDC2PQ6P474 469 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 TRMT1LQ7Z2T5 733 aaKnown RBP14.98□□□□□ -0.01
RPAIN-216ENST00000575599 CKAP2LQ8IYA6 745 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 SNX21Q969T3 373 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 TMX3Q96JJ7 454 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms