RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 ABHD15Q6UXT9 468 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 TRIM50Q86XT4 487 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 PRDM5Q9NQX1 630 aaPredicted RBP20.14■□□□□ 0.81
CLDN7-208ENST00000575313 TMEM39AQ9NV64 488 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 CFAP45Q9UL16 551 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 PCDHA10Q9Y5I2 948 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 TNRC18O15417 2968 aaPredicted RBP20.14■□□□□ 0.81
CLDN7-208ENST00000575313 IGKV6D-21A0A0A0MT36 114 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 H0YGN5 161 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 BACH1O14867 736 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 B4GALT4O60513 344 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 PSAPP07602 524 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 SFNP31947 248 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 STAT5BP51692 787 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 JAK3P52333 1124 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 FAM160B1Q5W0V3 765 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 PLPPR4Q7Z2D5 763 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 RDM1Q8NG50 284 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 TRPV6Q9H1D0 765 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 HDAC6Q9UBN7 1215 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 GTF2IRD1Q9UHL9 959 aa20.13■□□□□ 0.81
CLDN7-208ENST00000575313 KIAA0355O15063 1070 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 CALCRLQ16602 461 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 PRPF38BQ5VTL8 546 aaKnown RBP20.12■□□□□ 0.81
CLDN7-208ENST00000575313 AFAP1L1Q8TED9 768 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 HAS1Q92839 578 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 PCYT2Q99447 389 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 DISC1Q9NRI5 854 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 TRMT13Q9NUP7 481 aaKnown RBP20.12■□□□□ 0.81
CLDN7-208ENST00000575313 TBX21Q9UL17 535 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 ZMYND8Q9ULU4 1186 aaPredicted RBP20.12■□□□□ 0.81
CLDN7-208ENST00000575313 CEP131Q9UPN4 1083 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 NOD1Q9Y239 953 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 SAMM50Q9Y512 469 aa20.12■□□□□ 0.81
CLDN7-208ENST00000575313 SMIM10L2AP0DMW4 78 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 SMIM10L2BP0DMW5 78 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 SYN1P17600 705 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 NASPP49321 788 aaPredicted RBP20.11■□□□□ 0.81
CLDN7-208ENST00000575313 B3GNT9Q6UX72 402 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 CLEC17AQ6ZS10 378 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 PPP1R13LQ8WUF5 828 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 GJA10Q969M2 543 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 UNC45AQ9H3U1 944 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 ZNF302Q9NR11 478 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 MYH15Q9Y2K3 1946 aa20.11■□□□□ 0.81
CLDN7-208ENST00000575313 TRIM43BA6NCK2 446 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 CHMP2AO43633 222 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 BMP15O95972 392 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 GNAT1P11488 350 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 PTGDRQ13258 359 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 PPP2R5CQ13362 524 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 SLC39A14Q15043 492 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 STK38Q15208 465 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 PTPAQ15257 358 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 PTGISQ16647 500 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 GDF6Q6KF10 455 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-208ENST00000575313 SWSAP1Q6NVH7 229 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 MIER3Q7Z3K6 550 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 SH3RF1Q7Z6J0 888 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 CCDC60Q8IWA6 550 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-208ENST00000575313 C4orf32Q8N8J7 132 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 LINC00301Q8NCQ3 95 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 TRIM43Q96BQ3 446 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-208ENST00000575313 SCAND2PQ9GZW5 306 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-208ENST00000575313 RNPEPQ9H4A4 650 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 RCOR1Q9UKL0 485 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 VAV3Q9UKW4 847 aa20.1■□□□□ 0.81
CLDN7-208ENST00000575313 DNAH12Q6ZR08 3092 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 NRCAMQ92823 1304 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 C17orf102A2RUQ5 167 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 YEATS4O95619 227 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 RAG1P15918 1043 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 MARK3P27448 753 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 HOXC8P31273 242 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 PDXDC2PQ6P474 469 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 SPATA32Q96LK8 384 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 MTMR9Q96QG7 549 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 LBHD1Q9BQE6 289 aaPredicted RBP20.09■□□□□ 0.81
CLDN7-208ENST00000575313 TMEM60Q9H2L4 133 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 PCDHA12Q9UN75 941 aa20.09■□□□□ 0.81
CLDN7-208ENST00000575313 MAFBQ9Y5Q3 323 aaPredicted RBP20.09■□□□□ 0.81
CLDN7-208ENST00000575313 ATP2C1P98194 919 aaPredicted RBP20.08■□□□□ 0.81
CLDN7-208ENST00000575313 PPFIA1Q13136 1202 aa20.08■□□□□ 0.81
CLDN7-208ENST00000575313 CCDC155Q8N6L0 562 aa20.08■□□□□ 0.81
CLDN7-208ENST00000575313 LEO1Q8WVC0 666 aaPredicted RBP20.08■□□□□ 0.81
CLDN7-208ENST00000575313 GBP4Q96PP9 640 aa20.08■□□□□ 0.81
CLDN7-208ENST00000575313 HIPK3Q9H422 1215 aa20.08■□□□□ 0.81
CLDN7-208ENST00000575313 GDPD2Q9HCC8 539 aa20.08■□□□□ 0.81
CLDN7-208ENST00000575313 GABBR1Q9UBS5 961 aa20.08■□□□□ 0.81
CLDN7-208ENST00000575313 TRPC6Q9Y210 931 aa20.08■□□□□ 0.81
CLDN7-208ENST00000575313 IGSF9BQ9UPX0 1349 aa20.07■□□□□ 0.8
CLDN7-208ENST00000575313 POTEB3A0JP26 581 aa20.07■□□□□ 0.8
CLDN7-208ENST00000575313 RRN3P2A6NIE6 340 aa20.07■□□□□ 0.8
CLDN7-208ENST00000575313 SPTLC2O15270 562 aa20.07■□□□□ 0.8
CLDN7-208ENST00000575313 TIMP1P01033 207 aa20.07■□□□□ 0.8
CLDN7-208ENST00000575313 OR52Z1P0C646 297 aa20.07■□□□□ 0.8
CLDN7-208ENST00000575313 MARCKSP29966 332 aaPredicted RBP20.07■□□□□ 0.8
CLDN7-208ENST00000575313 PLCB4Q15147 1175 aa20.07■□□□□ 0.8
CLDN7-208ENST00000575313 POTEBQ6S5H4 581 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms