RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SLC26A2P50443 739 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 PLPPR4Q7Z2D5 763 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 CCDC60Q8IWA6 550 aaPredicted RBP19.2■□□□□ 0.66
NUP88-210ENST00000574867 LEO1Q8WVC0 666 aaPredicted RBP19.2■□□□□ 0.66
NUP88-210ENST00000574867 GLG1Q92896 1179 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 ATP6V0A1Q93050 837 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 C16orf70Q9BSU1 422 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 ZNF302Q9NR11 478 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 STAT5BP51692 787 aa19.19■□□□□ 0.66
NUP88-210ENST00000574867 UTP14CQ5TAP6 766 aaKnown RBP19.19■□□□□ 0.66
NUP88-210ENST00000574867 CXCL17Q6UXB2 119 aa19.19■□□□□ 0.66
NUP88-210ENST00000574867 GLT1D1Q96MS3 346 aa19.19■□□□□ 0.66
NUP88-210ENST00000574867 PCYT2Q99447 389 aa19.19■□□□□ 0.66
NUP88-210ENST00000574867 ERAP1Q9NZ08 941 aa19.19■□□□□ 0.66
NUP88-210ENST00000574867 MYH9P35579 1960 aaKnown RBP19.19■□□□□ 0.66
NUP88-210ENST00000574867 SCN10AQ9Y5Y9 1956 aa19.19■□□□□ 0.66
NUP88-210ENST00000574867 DKC1O60832 514 aaKnown RBP eCLIP19.18■□□□□ 0.66
NUP88-210ENST00000574867 P4HBP07237 508 aaKnown RBP19.18■□□□□ 0.66
NUP88-210ENST00000574867 SWSAP1Q6NVH7 229 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 CHAMP1Q96JM3 812 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 EIF2AK1Q9BQI3 630 aaKnown RBP19.18■□□□□ 0.66
NUP88-210ENST00000574867 GABBR1Q9UBS5 961 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 MAFBQ9Y5Q3 323 aaPredicted RBP19.18■□□□□ 0.66
NUP88-210ENST00000574867 A0A1W2PQ45 241 aaPredicted RBP19.18■□□□□ 0.66
NUP88-210ENST00000574867 A0A1W2PQY0 241 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 H3BRB1 525 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 ME1P48163 572 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 KRT79Q5XKE5 535 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 TRIM50Q86XT4 487 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 TUT1Q9H6E5 874 aaKnown RBP19.18■□□□□ 0.66
NUP88-210ENST00000574867 BRCA2P51587 3418 aa19.18■□□□□ 0.66
NUP88-210ENST00000574867 CUTAO60888 179 aa19.17■□□□□ 0.66
NUP88-210ENST00000574867 QARSP47897 775 aaKnown RBP19.17■□□□□ 0.66
NUP88-210ENST00000574867 MNX1P50219 401 aaPredicted RBP19.17■□□□□ 0.66
NUP88-210ENST00000574867 PSMC5P62195 406 aa19.17■□□□□ 0.66
NUP88-210ENST00000574867 PDXDC2PQ6P474 469 aa19.17■□□□□ 0.66
NUP88-210ENST00000574867 ZNF579Q8NAF0 562 aaKnown RBP19.17■□□□□ 0.66
NUP88-210ENST00000574867 KAT2BQ92831 832 aa19.17■□□□□ 0.66
NUP88-210ENST00000574867 HSD17B14Q9BPX1 270 aa19.17■□□□□ 0.66
NUP88-210ENST00000574867 POLR3CQ9BUI4 534 aaPredicted RBP19.17■□□□□ 0.66
NUP88-210ENST00000574867 CSRNP2Q9H175 543 aa19.17■□□□□ 0.66
NUP88-210ENST00000574867 TUFT1Q9NNX1 390 aa19.17■□□□□ 0.66
NUP88-210ENST00000574867 SLC26A4O43511 780 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 MUTP22033 750 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 MFSD10Q14728 455 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 CSPP1Q1MSJ5 1256 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 SNX29Q8TEQ0 813 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 FAM167AQ96KS9 214 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 LXNQ9BS40 222 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 HAS3O00219 553 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 RPA1P27694 616 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 PSEN2P49810 448 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 GRIN1Q05586 938 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 BANK1Q8NDB2 785 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 DYDC2Q96IM9 177 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 SEZ6LQ9BYH1 1024 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 ZSWIM4Q9H7M6 989 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 STARD7Q9NQZ5 370 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 KDM3AQ9Y4C1 1321 aa19.16■□□□□ 0.66
NUP88-210ENST00000574867 COL6A1P12109 1028 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 CYP4A11Q02928 519 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 UGCGQ16739 394 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 KIAA0753Q2KHM9 967 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 CLIC6Q96NY7 704 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 PCDHA7Q9UN72 937 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 CCDC85CA6NKD9 419 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 PP2D1A8MPX8 630 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 SLITRK3O94933 977 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 EN2P19622 333 aaPredicted RBP19.15■□□□□ 0.66
NUP88-210ENST00000574867 TXLNAP40222 546 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 CCT6AP40227 531 aaKnown RBP19.15■□□□□ 0.66
NUP88-210ENST00000574867 UBA7P41226 1012 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 PRKCEQ02156 737 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 CLEC17AQ6ZS10 378 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 C4orf19Q8IY42 314 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 CKAP2LQ8IYA6 745 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 RGL1Q9NZL6 768 aa19.15■□□□□ 0.66
NUP88-210ENST00000574867 A0A0U1RQG5 324 aaPredicted RBP19.14■□□□□ 0.65
NUP88-210ENST00000574867 LYPLA2O95372 231 aa19.14■□□□□ 0.65
NUP88-210ENST00000574867 OATP04181 439 aa19.14■□□□□ 0.65
NUP88-210ENST00000574867 MARK3P27448 753 aa19.14■□□□□ 0.65
NUP88-210ENST00000574867 AXDND1Q5T1B0 1012 aaPredicted RBP19.14■□□□□ 0.65
NUP88-210ENST00000574867 NECAB2Q7Z6G3 386 aa19.14■□□□□ 0.65
NUP88-210ENST00000574867 CATSPER3Q86XQ3 398 aa19.14■□□□□ 0.65
NUP88-210ENST00000574867 DIS3LQ8TF46 1054 aaKnown RBP19.14■□□□□ 0.65
NUP88-210ENST00000574867 ATP8B4Q8TF62 1192 aa19.14■□□□□ 0.65
NUP88-210ENST00000574867 BBXQ8WY36 941 aaPredicted RBP19.14■□□□□ 0.65
NUP88-210ENST00000574867 C11orf49Q9H6J7 331 aa19.14■□□□□ 0.65
NUP88-210ENST00000574867 ZNF862O60290 1169 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 MED24O75448 989 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 SPATA31C1P0DKV0 1188 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 CTTNQ14247 550 aaKnown RBP19.13■□□□□ 0.65
NUP88-210ENST00000574867 NFRKBQ6P4R8 1299 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 CABP7Q86V35 215 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 TPH2Q8IWU9 490 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 KCTD17Q8N5Z5 321 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 VTI1AQ96AJ9 217 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 MMTAG2Q9BU76 263 aaKnown RBP19.13■□□□□ 0.65
NUP88-210ENST00000574867 CCSER1Q9C0I3 900 aa19.13■□□□□ 0.65
NUP88-210ENST00000574867 SENP6Q9GZR1 1112 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms