RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZNF865P0CJ78 1059 aaPredicted RBP26.9■■□□□ 1.9
ATPAF1-213ENST00000574428 PSMC6P62333 389 aa26.9■■□□□ 1.9
ATPAF1-213ENST00000574428 MDM2Q00987 491 aaPredicted RBP26.9■■□□□ 1.9
ATPAF1-213ENST00000574428 KANK3Q6NY19 840 aa26.9■■□□□ 1.9
ATPAF1-213ENST00000574428 SH3RF1Q7Z6J0 888 aa26.9■■□□□ 1.9
ATPAF1-213ENST00000574428 RAD54LQ92698 747 aa26.9■■□□□ 1.9
ATPAF1-213ENST00000574428 ADCY6O43306 1168 aa26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 P4HBP07237 508 aaKnown RBP26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 PSAPP07602 524 aa26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 SMPD1P17405 629 aa26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 ARHGAP1Q07960 439 aa26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 DHX8Q14562 1220 aaKnown RBP26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 MCM6Q14566 821 aa26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 POSTNQ15063 836 aa26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 ABHD15Q6UXT9 468 aa26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 LARP4BQ92615 738 aaKnown RBP26.89■■□□□ 1.9
ATPAF1-213ENST00000574428 SUPT20HL2P0C7V6 817 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 CASP1P29466 404 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 QARSP47897 775 aaKnown RBP26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 HSDL1Q3SXM5 330 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 IQSEC1Q6DN90 963 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 MIS18BP1Q6P0N0 1132 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 RBM43Q6ZSC3 357 aaKnown RBP26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 CCDC34Q96HJ3 373 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 SPATA33Q96N06 139 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 KBTBD4Q9NVX7 518 aa26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 HOOK1Q9UJC3 728 aaKnown RBP26.89■■□□□ 1.89
ATPAF1-213ENST00000574428 GSTTP1A0A1W2PQM5 241 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 GNRH1P01148 92 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 ELNP15502 786 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 IRF5Q13568 498 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 DUSP28Q4G0W2 176 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 MFSD14CQ5VZR4 134 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 SWSAP1Q6NVH7 229 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 CCDC60Q8IWA6 550 aaPredicted RBP26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 ELOA2Q8IYF1 753 aaPredicted RBP26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 PIGOQ8TEQ8 1089 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 MAGEF1Q9HAY2 307 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 GABBR1Q9UBS5 961 aa26.88■■□□□ 1.89
ATPAF1-213ENST00000574428 LETM1O95202 739 aaPredicted RBP26.87■■□□□ 1.89
ATPAF1-213ENST00000574428 ATG7O95352 703 aa26.87■■□□□ 1.89
ATPAF1-213ENST00000574428 GH1P01241 217 aa26.87■■□□□ 1.89
ATPAF1-213ENST00000574428 TNFAIP2Q03169 654 aa26.87■■□□□ 1.89
ATPAF1-213ENST00000574428 GPR20Q99678 358 aa26.87■■□□□ 1.89
ATPAF1-213ENST00000574428 ZSWIM4Q9H7M6 989 aa26.87■■□□□ 1.89
ATPAF1-213ENST00000574428 DNM3Q9UQ16 869 aa26.87■■□□□ 1.89
ATPAF1-213ENST00000574428 NOP56O00567 594 aaKnown RBP26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 BACH1O14867 736 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 ZBTB39O15060 712 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 SSBP05455 408 aaKnown RBP eCLIP26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 MUTP22033 750 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 TRIM32Q13049 653 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 TRPV1Q8NER1 839 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 BLZF1Q9H2G9 400 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 PLA2G4BP0C869 781 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 PSMC5P62195 406 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 LAMC2Q13753 1193 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 SV2BQ7L1I2 683 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 TRMT44Q8IYL2 757 aaKnown RBP26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 RAET1EQ8TD07 263 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 LENG1Q96BZ8 264 aaPredicted RBP26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 KIAA1468Q9P260 1216 aa26.86■■□□□ 1.89
ATPAF1-213ENST00000574428 TCF7P36402 384 aaPredicted RBP26.85■■□□□ 1.89
ATPAF1-213ENST00000574428 CUL4BQ13620 913 aa26.85■■□□□ 1.89
ATPAF1-213ENST00000574428 ARHGEF6Q15052 776 aa26.85■■□□□ 1.89
ATPAF1-213ENST00000574428 SEPT1Q8WYJ6 367 aa26.85■■□□□ 1.89
ATPAF1-213ENST00000574428 ADCY3O60266 1144 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 CYBAP13498 195 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 TRMT1LQ7Z2T5 733 aaKnown RBP26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 ATP6V0A1Q93050 837 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 NACC1Q96RE7 527 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 BHMT2Q9H2M3 363 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 FSD2A1L4K1 749 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 NKRFO15226 690 aaKnown RBP eCLIP26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 GTPBP6O43824 516 aaPredicted RBP26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 EYA4O95677 639 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 DPYDQ12882 1025 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 OR6J1Q8NGC5 347 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 EMID1Q96A84 441 aaPredicted RBP26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 PCYT2Q99447 389 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 ZNF302Q9NR11 478 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 PCDHA5Q9Y5H7 936 aa26.84■■□□□ 1.89
ATPAF1-213ENST00000574428 IGSF9BQ9UPX0 1349 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 IGKV6D-21A0A0A0MT36 114 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 ZNF862O60290 1169 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 LYPLA2O95372 231 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 SLC12A3P55017 1021 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 C4orf19Q8IY42 314 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 KCTD17Q8N5Z5 321 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 AFG1LQ8WV93 481 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 NRBP1Q9UHY1 535 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 FAM184BQ9ULE4 1060 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 WDR81Q562E7 1941 aa26.83■■□□□ 1.89
ATPAF1-213ENST00000574428 TMEM150BA6NC51 233 aa26.82■■□□□ 1.88
ATPAF1-213ENST00000574428 MYMKA6NI61 221 aa26.82■■□□□ 1.88
ATPAF1-213ENST00000574428 CACNB2Q08289 660 aaPredicted RBP26.82■■□□□ 1.88
ATPAF1-213ENST00000574428 PPTC7Q8NI37 304 aa26.82■■□□□ 1.88
ATPAF1-213ENST00000574428 GNEQ9Y223 722 aaKnown RBP26.82■■□□□ 1.88
ATPAF1-213ENST00000574428 TRIM17Q9Y577 477 aa26.82■■□□□ 1.88
ATPAF1-213ENST00000574428 BIN1O00499 593 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms