RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 TUBE1Q9UJT0 475 aa18.76■□□□□ 0.59
TVP23B-207ENST00000574294 MBLAC1A4D2B0 266 aaPredicted RBP18.75■□□□□ 0.59
TVP23B-207ENST00000574294 FAM86B1E9PN63 330 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 IPO5O00410 1097 aaKnown RBP18.75■□□□□ 0.59
TVP23B-207ENST00000574294 ATG7O95352 703 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 FAM86B2P0C5J1 330 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 CIITAP33076 1130 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 STAT5BP51692 787 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 USP11P51784 963 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 NLRP5P59047 1200 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 ITGB3BPQ13352 177 aaPredicted RBP18.75■□□□□ 0.59
TVP23B-207ENST00000574294 MBTPS1Q14703 1052 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 GRIK4Q16099 956 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 PLEKHG4Q58EX7 1191 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 FAM26DQ5JW98 314 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 FAM160B1Q5W0V3 765 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 FAM43BQ6ZT52 329 aaPredicted RBP18.75■□□□□ 0.59
TVP23B-207ENST00000574294 TELO2Q9Y4R8 837 aa18.75■□□□□ 0.59
TVP23B-207ENST00000574294 IGLV3-22A0A075B6J6 115 aa18.74■□□□□ 0.59
TVP23B-207ENST00000574294 TLL1O43897 1013 aa18.74■□□□□ 0.59
TVP23B-207ENST00000574294 IL17RAQ96F46 866 aa18.74■□□□□ 0.59
TVP23B-207ENST00000574294 ZNF577Q9BSK1 485 aa18.74■□□□□ 0.59
TVP23B-207ENST00000574294 ZBED2Q9BTP6 218 aa18.74■□□□□ 0.59
TVP23B-207ENST00000574294 PRDM12Q9H4Q4 367 aa18.74■□□□□ 0.59
TVP23B-207ENST00000574294 VPS54Q9P1Q0 977 aa18.74■□□□□ 0.59
TVP23B-207ENST00000574294 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 AMHP03971 560 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 CA3P07451 260 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 XBP1P17861 261 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 MARK3P27448 753 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 KRT76Q01546 638 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 ZNF746Q6NUN9 644 aaPredicted RBP18.73■□□□□ 0.59
TVP23B-207ENST00000574294 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.73■□□□□ 0.59
TVP23B-207ENST00000574294 SMAP1Q8IYB5 467 aaPredicted RBP18.73■□□□□ 0.59
TVP23B-207ENST00000574294 DBF4BQ8NFT6 615 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 RAD9AQ99638 391 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
TVP23B-207ENST00000574294 TRPC6Q9Y210 931 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 MICAL3Q7RTP6 2002 aa18.73■□□□□ 0.59
TVP23B-207ENST00000574294 MYH9P35579 1960 aaKnown RBP18.72■□□□□ 0.59
TVP23B-207ENST00000574294 GJB5O95377 273 aa18.72■□□□□ 0.59
TVP23B-207ENST00000574294 INSRRP14616 1297 aa18.72■□□□□ 0.59
TVP23B-207ENST00000574294 MIS18BP1Q6P0N0 1132 aa18.72■□□□□ 0.59
TVP23B-207ENST00000574294 ABHD15Q6UXT9 468 aa18.72■□□□□ 0.59
TVP23B-207ENST00000574294 PCYT2Q99447 389 aa18.72■□□□□ 0.59
TVP23B-207ENST00000574294 PCDHA4Q9UN74 947 aa18.72■□□□□ 0.59
TVP23B-207ENST00000574294 CUL9Q8IWT3 2517 aa18.72■□□□□ 0.59
TVP23B-207ENST00000574294 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 BACH1O14867 736 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 DHX15O43143 795 aaKnown RBP18.71■□□□□ 0.59
TVP23B-207ENST00000574294 HBP1O60381 514 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 CTSHP09668 335 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 MYOGP15173 224 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 PRR16Q569H4 304 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 IER5Q5VY09 327 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 DAGLBQ8NCG7 672 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 SQORQ9Y6N5 450 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 STK36Q9NRP7 1315 aa18.71■□□□□ 0.59
TVP23B-207ENST00000574294 COL1A2P08123 1366 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 M0QZ92 97 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 PFKFB2O60825 505 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 CCNE2O96020 404 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 TAP1Q03518 808 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 STK3Q13188 491 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 PLCB4Q15147 1175 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 MARCH8Q5T0T0 291 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 BLIDQ8IZY5 108 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 NME8Q8N427 588 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 ATP8B4Q8TF62 1192 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 WASF1Q92558 559 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 RIT2Q99578 217 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 IFIH1Q9BYX4 1025 aaKnown RBP18.7■□□□□ 0.58
TVP23B-207ENST00000574294 ZNF302Q9NR11 478 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 INSL6Q9Y581 213 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 PCDHA2Q9Y5H9 948 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 PCDHA10Q9Y5I2 948 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 PTPRSQ13332 1948 aa18.7■□□□□ 0.58
TVP23B-207ENST00000574294 TRANK1O15050 2925 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 PPFIA3O75145 1194 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 PSAPP07602 524 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 POU3F3P20264 500 aaPredicted RBP18.69■□□□□ 0.58
TVP23B-207ENST00000574294 DEFB103AP81534 67 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 MKRN4PQ13434 485 aaPredicted RBP18.69■□□□□ 0.58
TVP23B-207ENST00000574294 ZNF484Q5JVG2 852 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 PDXDC2PQ6P474 469 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 MOXD1Q6UVY6 613 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 RASGRP4Q8TDF6 673 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 CDH23Q9H251 3354 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 A0A0C4DFX4 3053 aa18.69■□□□□ 0.58
TVP23B-207ENST00000574294 SMIM35A0A1B0GVV1 85 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 DDX39AO00148 427 aaKnown RBP18.68■□□□□ 0.58
TVP23B-207ENST00000574294 GTPBP6O43824 516 aaPredicted RBP18.68■□□□□ 0.58
TVP23B-207ENST00000574294 CHRNA1P02708 482 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 IGFBP4P22692 258 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 SFNP31947 248 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 IGBP1P78318 339 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 MRPS6P82932 125 aaKnown RBP18.68■□□□□ 0.58
TVP23B-207ENST00000574294 SCRN1Q12765 414 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms