RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 LGR5O75473 907 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 PSAPP07602 524 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 GNAT1P11488 350 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 SFNP31947 248 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 SLC26A2P50443 739 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 JAK3P52333 1124 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 CHMP4BP1P59074 171 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 FAM160B1Q5W0V3 765 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 ABHD15Q6UXT9 468 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 PLPPR4Q7Z2D5 763 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 FAM126BQ8IXS8 530 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 RDM1Q8NG50 284 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 ETNPPLQ8TBG4 499 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 GLG1Q92896 1179 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 TMEM39AQ9NV64 488 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 SAMM50Q9Y512 469 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 PCDHA10Q9Y5I2 948 aa12.45□□□□□ -0.42
CHD3-216ENST00000573936 IGKV6D-21A0A0A0MT36 114 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 WDR64B1ANS9 1081 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 BACH1O14867 736 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 NEMFO60524 1076 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 PSMD10O75832 226 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 CD4P01730 458 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 STAT5BP51692 787 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 FAAP100Q0VG06 881 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 BECN1Q14457 450 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 CALCRLQ16602 461 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 AFAP1L1Q8TED9 768 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
CHD3-216ENST00000573936 HDAC6Q9UBN7 1215 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 GTF2IRD1Q9UHL9 959 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 NOD1Q9Y239 953 aa12.44□□□□□ -0.42
CHD3-216ENST00000573936 C17orf102A2RUQ5 167 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 KIF28PB7ZC32 967 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 KIAA0355O15063 1070 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 B4GALT4O60513 344 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 CCNE2O96020 404 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 RAG1P15918 1043 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 ATP2B1P20020 1258 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 ITGB8P26012 769 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 MCM7P33993 719 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 RILPL1Q5EBL4 403 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 MIER3Q7Z3K6 550 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 UIMC1Q96RL1 719 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 UNC45AQ9H3U1 944 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 ZNF302Q9NR11 478 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 DISC1Q9NRI5 854 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 TELO2Q9Y4R8 837 aa12.43□□□□□ -0.42
CHD3-216ENST00000573936 NRCAMQ92823 1304 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 TTC28Q96AY4 2481 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 VPS37CA5D8V6 355 aaPredicted RBP12.42□□□□□ -0.42
CHD3-216ENST00000573936 DKC1O60832 514 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHD3-216ENST00000573936 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 SYT1P21579 422 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 ANP32AP39687 249 aaKnown RBP12.42□□□□□ -0.42
CHD3-216ENST00000573936 PPP2R5CQ13362 524 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 ZNF174Q15697 407 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 PTGISQ16647 500 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 SWSAP1Q6NVH7 229 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 HAS1Q92839 578 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 PCYT2Q99447 389 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 TRPV6Q9H1D0 765 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 RNPEPQ9H4A4 650 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 PCDHA12Q9UN75 941 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 MAFBQ9Y5Q3 323 aaPredicted RBP12.42□□□□□ -0.42
CHD3-216ENST00000573936 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
CHD3-216ENST00000573936 SCN10AQ9Y5Y9 1956 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 RRN3P2A6NIE6 340 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 CHMP2AO43633 222 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 HBP1O60381 514 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 TIMP1P01033 207 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 MARK3P27448 753 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 EPHB4P54760 987 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 PTK7Q13308 1070 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 BFSP2Q13515 415 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 GDF6Q6KF10 455 aaPredicted RBP12.41□□□□□ -0.42
CHD3-216ENST00000573936 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 B3GNT9Q6UX72 402 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 CCDC60Q8IWA6 550 aaPredicted RBP12.41□□□□□ -0.42
CHD3-216ENST00000573936 CKAP2LQ8IYA6 745 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 ATP6V0A1Q93050 837 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 FAM167AQ96KS9 214 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 TTYH1Q9H313 450 aaPredicted RBP12.41□□□□□ -0.42
CHD3-216ENST00000573936 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
CHD3-216ENST00000573936 NRBP2Q9NSY0 501 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 TRMT13Q9NUP7 481 aaKnown RBP12.41□□□□□ -0.42
CHD3-216ENST00000573936 GABBR1Q9UBS5 961 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 TBX21Q9UL17 535 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms