RNA–Protein interactions for RNA: ENST00000573536.1

ZZEF1-208, Transcript of zinc finger ZZ-type and EF-hand domain containing 1, human

TSL 2

Gene ZZEF1, Length 3,190 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZZEF1-208	ENST00000573536	REEP2	Q9BRK0	252 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	AP1M1	Q9BXS5	423 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	DHX36	Q9H2U1	1008 aa	Known RBP	13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SRCAP	Q6ZRS2	3230 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	FAM153B	P0C7A2	387 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PTK2	Q05397	1052 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	TRADD	Q15628	312 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	FAM153C	Q494X1	144 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CAPS2	Q9BXY5	557 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	COA1	Q9GZY4	146 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	RGL1	Q9NZL6	768 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	FAM153A	Q9UHL3	310 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	BCS1L	Q9Y276	419 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SAMM50	Q9Y512	469 aa		13.57	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SSU72P8	A0A1W2PR75	194 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	RGL2	O15211	777 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	OPA1	O60313	960 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SNHG28	P0DPA3	235 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PRPF4B	Q13523	1007 aa	Known RBP	13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SLC18A3	Q16572	532 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	EXOC3L4	Q17RC7	722 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CRY2	Q49AN0	593 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	MSL1	Q68DK7	614 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	C15orf52	Q6ZUT6	534 aa	Known RBP	13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	KSR1	Q8IVT5	923 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	TRIM59	Q8IWR1	403 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	BCAS4	Q8TDM0	211 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	TRIM37	O94972	964 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	GNA14	O95837	355 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CRK	P46108	304 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	KCNA1	Q09470	495 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PDCL	Q13371	301 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	RPS6KA1	Q15418	735 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ZYX	Q15942	572 aa	Known RBP	13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ZCWPW2	Q504Y3	356 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	COBLL1	Q53SF7	1204 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PPP1R18	Q6NYC8	613 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	MAEA	Q7L5Y9	396 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ADAT2	Q7Z6V5	191 aa	Known RBP	13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	TPH2	Q8IWU9	490 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	RDH13	Q8NBN7	331 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CEP63	Q96MT8	703 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	NUCKS1	Q9H1E3	243 aa	Known RBP	13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PKD2L1	Q9P0L9	805 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	BTAF1	O14981	1849 aa		13.56	□□□□□ -0.24
ZZEF1-208	ENST00000573536	DDTL	A6NHG4	134 aa	Predicted RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CFB	P00751	764 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	HPD	P32754	393 aa	Predicted RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CASP4	P49662	377 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CTTN	Q14247	550 aa	Known RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ARSH	Q5FYA8	562 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SBF2	Q86WG5	1849 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	TULP2	O00295	520 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	NAA35	Q5VZE5	725 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	FBXO11	Q86XK2	927 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ZIM3	Q96PE6	472 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	DNAJC5	Q9H3Z4	198 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	GFPT2	O94808	682 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	AFP	P02771	609 aa	Known RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ABCB4	P21439	1286 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CLK2	P49760	499 aa	Known RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PPFIA1	Q13136	1202 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	NAB2	Q15742	525 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SEPT12	Q8IYM1	358 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SLFN12	Q8IYM2	578 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	RNF10	Q8N5U6	811 aa	Known RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	MSL3	Q8N5Y2	521 aa	Known RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	MYCT1	Q8N699	235 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	U2AF1L4	Q8WU68	220 aa	Known RBP	13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	AMN	Q9BXJ7	453 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	TRIM31	Q9BZY9	425 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	GCNT4	Q9P109	453 aa		13.55	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ABCB11	O95342	1321 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	MYH7B	A7E2Y1	1941 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	SHTN1	A0MZ66	631 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536		F5H6K3	240 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PPFIA4	O75335	1185 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	KLRC3	Q07444	240 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PAK2	Q13177	524 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ASTE1	Q2TB18	679 aa	Predicted RBP	13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	TSKS	Q9UJT2	592 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	PJA2	O43164	708 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	FAM13A	O94988	1023 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	LCA5L	O95447	670 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	EPB41	P11171	864 aa	Known RBP	13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	UCHL3	P15374	230 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CYP2J2	P51589	502 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	KNOP1	Q1ED39	458 aa	Known RBP	13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ALKBH5	Q6P6C2	394 aa	Known RBP	13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	CCDC174	Q6PII3	467 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	KCTD10	Q9H3F6	313 aa		13.54	□□□□□ -0.24
ZZEF1-208	ENST00000573536	IGKV6D-41	A0A0C4DH26	115 aa		13.53	□□□□□ -0.24
ZZEF1-208	ENST00000573536	GRID2IP	A4D2P6	1211 aa		13.53	□□□□□ -0.24
ZZEF1-208	ENST00000573536	FAM86B1	E9PN63	330 aa		13.53	□□□□□ -0.24
ZZEF1-208	ENST00000573536	DDX39A	O00148	427 aa	Known RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms