RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TRIM50Q86XT4 487 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 REXO1Q8N1G1 1221 aaKnown RBP10.34□□□□□ -0.75
NDE1-207ENST00000573203 CYP2W1Q8TAV3 490 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 AFAP1L1Q8TED9 768 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 SEPT1Q8WYJ6 367 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 DHX38Q92620 1227 aaKnown RBP10.34□□□□□ -0.75
NDE1-207ENST00000573203 ATP6V0A1Q93050 837 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 FAM161BQ96MY7 647 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 CTAGE1Q96RT6 745 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 SDF4Q9BRK5 362 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 FTOQ9C0B1 505 aaKnown RBP eCLIP10.34□□□□□ -0.753e-6■□□□□ 8.5
NDE1-207ENST00000573203 KCNH7Q9NS40 1196 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 CXXC1Q9P0U4 656 aaPredicted RBP10.34□□□□□ -0.75
NDE1-207ENST00000573203 VPS54Q9P1Q0 977 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 TELO2Q9Y4R8 837 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 NUDT7P0C024 238 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 ARP10275 920 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 GNAT1P11488 350 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 CKBP12277 381 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 SELPP16109 830 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 DNAJB2P25686 324 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 NLRP5P59047 1200 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 RBL2Q08999 1139 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 ANKRD1Q15327 319 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 LRRC8DQ7L1W4 858 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 ZNF687Q8N1G0 1237 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 SLKQ9H2G2 1235 aaPredicted RBP10.33□□□□□ -0.76
NDE1-207ENST00000573203 JPH1Q9HDC5 661 aaPredicted RBP10.33□□□□□ -0.76
NDE1-207ENST00000573203 SH3GLB2Q9NR46 395 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 SLC9A2Q9UBY0 812 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 SLC4A7Q9Y6M7 1214 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 GBF1Q92538 1859 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 TET1Q8NFU7 2136 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 NFASCO94856 1347 aa10.33□□□□□ -0.76
NDE1-207ENST00000573203 TMEM265A0A087WTH1 108 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 GSTTP1A0A1W2PQM5 241 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 GRXCR1A8MXD5 290 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 MEIS1O00470 390 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 ADAMTS3O15072 1205 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 TREHO43280 583 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 CDKL5O76039 1030 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 DEXIO95424 95 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 PARNO95453 639 aaKnown RBP10.32□□□□□ -0.76
NDE1-207ENST00000573203 MARK3P27448 753 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 THPOP40225 353 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 MCM2P49736 904 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 HIC1Q14526 733 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 NIPA1Q7RTP0 329 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 SERINC5Q86VE9 423 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 HSCBQ8IWL3 235 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 RASGRP4Q8TDF6 673 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 GLG1Q92896 1179 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 KHSRPQ92945 711 aaKnown RBP eCLIP10.32□□□□□ -0.76
NDE1-207ENST00000573203 WNT8BQ93098 351 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 TIFAQ96CG3 184 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 VWCEQ96DN2 955 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 SEMA6BQ9H3T3 888 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 RNPEPQ9H4A4 650 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 SMARCAD1Q9H4L7 1026 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 AZI2Q9H6S1 392 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 AGO4Q9HCK5 861 aaKnown RBP10.32□□□□□ -0.76
NDE1-207ENST00000573203 SETD4Q9NVD3 440 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 ERAP1Q9NZ08 941 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 MSRAQ9UJ68 235 aa10.32□□□□□ -0.76
NDE1-207ENST00000573203 FAM86B1E9PN63 330 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 CYP3A4P08684 503 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 FAM86B2P0C5J1 330 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 HOXC8P31273 242 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 PBX2P40425 430 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 AK2P54819 239 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 ACTR2P61160 394 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 SCRN1Q12765 414 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 ITGB3BPQ13352 177 aaPredicted RBP10.31□□□□□ -0.76
NDE1-207ENST00000573203 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
NDE1-207ENST00000573203 ZNF618Q5T7W0 954 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 GUCD1Q96NT3 240 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 PBX4Q9BYU1 374 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 TTYH1Q9H313 450 aaPredicted RBP10.31□□□□□ -0.76
NDE1-207ENST00000573203 TPCN1Q9ULQ1 816 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 STXBP5LQ9Y2K9 1186 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 EMSYQ7Z589 1322 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 NRCAMQ92823 1304 aa10.31□□□□□ -0.76
NDE1-207ENST00000573203 RSPH10B2B2RC85 870 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 DDX39AO00148 427 aaKnown RBP10.3□□□□□ -0.76
NDE1-207ENST00000573203 PFKFB2O60825 505 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 NBNO60934 754 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 LGR5O75473 907 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 RSPH10BP0C881 870 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 ATP2A2P16615 1042 aaKnown RBP10.3□□□□□ -0.76
NDE1-207ENST00000573203 KCNJ6P48051 423 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 NEK4P51957 841 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 SETQ01105 290 aaPredicted RBP10.3□□□□□ -0.76
NDE1-207ENST00000573203 PPFIA1Q13136 1202 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 RAB30Q15771 203 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 CNKSR3Q6P9H4 555 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 BLIDQ8IZY5 108 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 FAM177A1Q8N128 213 aaPredicted RBP10.3□□□□□ -0.76
NDE1-207ENST00000573203 LMBR1Q8WVP7 490 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 CRYGNQ8WXF5 182 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms