RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 SRBD1Q8N5C6 995 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 UPF3BQ9BZI7 483 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 CDY2AQ9Y6F7 541 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 RRN3P2A6NIE6 340 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 SPDYE3A6NKU9 549 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 PRC1O43663 620 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 PLEKHA8P1O95397 391 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 MMP1P03956 469 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 IGBP1P78318 339 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 IER5Q5VY09 327 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 NFXL1Q6ZNB6 911 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 CMTR1Q8N1G2 835 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 POP1Q99575 1024 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 FTHL17Q9BXU8 183 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 PKD2L1Q9P0L9 805 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 RBM8AQ9Y5S9 174 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 SQORQ9Y6N5 450 aa11.32□□□□□ -0.6
TRAPPC1-205ENST00000572656 CCDC69A6NI79 296 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 MBTPS2O43462 519 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CALM1P0DP23 149 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CALM2P0DP24 149 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CALM3P0DP25 149 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 INSRRP14616 1297 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CD52P31358 61 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 MCM5P33992 734 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 IRS1P35568 1242 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 DLX2Q07687 328 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CAMK1Q14012 370 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CLUL1Q15846 466 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 UBE2SQ16763 222 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 CRIPAKQ8N1N5 446 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 LINC01599Q8WXQ3 324 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 P2RX5Q93086 422 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 TMEM87BQ96K49 555 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 PCYT2Q99447 389 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 FAM49AQ9H0Q0 323 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 KCNH6Q9H252 994 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 IGFLR1Q9H665 355 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 AZI2Q9H6S1 392 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 JPH1Q9HDC5 661 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 ALG13Q9NP73 1137 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 PLAGL2Q9UPG8 496 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 MRPL42Q9Y6G3 142 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-205ENST00000572656 M0QZ92 97 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 TBX10O75333 385 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 LIFRP42702 1097 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 ADAM15Q13444 863 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 SMAD4Q13485 552 aaKnown RBP11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 RTN4RL1Q86UN2 441 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 ALYREFQ86V81 257 aaKnown RBP11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 NPAS4Q8IUM7 802 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 SPPL3Q8TCT6 385 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 ZBTB10Q96DT7 871 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 KCNH7Q9NS40 1196 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 SLC9A2Q9UBY0 812 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 CD207Q9UJ71 328 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 PADI3Q9ULW8 664 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 PCDHA2Q9Y5H9 948 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 TRPV2Q9Y5S1 764 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 MICAL3Q7RTP6 2002 aa11.3□□□□□ -0.6
TRAPPC1-205ENST00000572656 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 LINC01565O15544 149 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 ITGB1P05556 798 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 RXRAP19793 462 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 PLCB4Q15147 1175 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 HERC4Q5GLZ8 1057 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 TMTC3Q6ZXV5 915 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 PLPPR4Q7Z2D5 763 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 TEX2Q8IWB9 1127 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 NME8Q8N427 588 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 MSLNLQ96KJ4 702 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 CELF4Q9BZC1 486 aaKnown RBP11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 SLC12A7Q9Y666 1083 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 NFASCO94856 1347 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 IGSF9BQ9UPX0 1349 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
TRAPPC1-205ENST00000572656 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
TRAPPC1-205ENST00000572656 SMIM35A0A1B0GVV1 85 aa11.28□□□□□ -0.6
TRAPPC1-205ENST00000572656 STXBP3O00186 592 aa11.28□□□□□ -0.6
TRAPPC1-205ENST00000572656 CSPG5O95196 566 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms