RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 KIAA0753Q2KHM9 967 aa8.83□□□□□ -1
SMG6-211ENST00000572369 PRR16Q569H4 304 aa8.83□□□□□ -1
SMG6-211ENST00000572369 NIPA1Q7RTP0 329 aa8.83□□□□□ -1
SMG6-211ENST00000572369 FAM126BQ8IXS8 530 aa8.83□□□□□ -1
SMG6-211ENST00000572369 DAGLBQ8NCG7 672 aa8.83□□□□□ -1
SMG6-211ENST00000572369 CYP2W1Q8TAV3 490 aa8.83□□□□□ -1
SMG6-211ENST00000572369 TBCKQ8TEA7 893 aa8.83□□□□□ -1
SMG6-211ENST00000572369 SEPT1Q8WYJ6 367 aa8.83□□□□□ -1
SMG6-211ENST00000572369 LLPHQ9BRT6 129 aaKnown RBP8.83□□□□□ -1
SMG6-211ENST00000572369 ZNF577Q9BSK1 485 aa8.83□□□□□ -1
SMG6-211ENST00000572369 PHF20Q9BVI0 1012 aa8.83□□□□□ -1
SMG6-211ENST00000572369 TRPV6Q9H1D0 765 aa8.83□□□□□ -1
SMG6-211ENST00000572369 TUT1Q9H6E5 874 aaKnown RBP8.83□□□□□ -1
SMG6-211ENST00000572369 AZI2Q9H6S1 392 aa8.83□□□□□ -1
SMG6-211ENST00000572369 BCAS3Q9H6U6 928 aa8.83□□□□□ -1
SMG6-211ENST00000572369 JPH1Q9HDC5 661 aaPredicted RBP8.83□□□□□ -1
SMG6-211ENST00000572369 GJB4Q9NTQ9 266 aa8.83□□□□□ -1
SMG6-211ENST00000572369 SLC9A2Q9UBY0 812 aa8.83□□□□□ -1
SMG6-211ENST00000572369 ZNF215Q9UL58 517 aaPredicted RBP8.83□□□□□ -1
SMG6-211ENST00000572369 KAT6AQ92794 2004 aa8.83□□□□□ -1
SMG6-211ENST00000572369 SCN10AQ9Y5Y9 1956 aa8.82□□□□□ -1
SMG6-211ENST00000572369 GRIN2DO15399 1336 aa8.82□□□□□ -1
SMG6-211ENST00000572369 DNAH14Q0VDD8 3507 aa8.82□□□□□ -1
SMG6-211ENST00000572369 TRIM43BA6NCK2 446 aa8.82□□□□□ -1
SMG6-211ENST00000572369 FAM86B1E9PN63 330 aa8.82□□□□□ -1
SMG6-211ENST00000572369 MEIS1O00470 390 aa8.82□□□□□ -1
SMG6-211ENST00000572369 MARCH6O60337 910 aa8.82□□□□□ -1
SMG6-211ENST00000572369 F2P00734 622 aa8.82□□□□□ -1
SMG6-211ENST00000572369 LGALS2P05162 132 aa8.82□□□□□ -1
SMG6-211ENST00000572369 FAM86B2P0C5J1 330 aa8.82□□□□□ -1
SMG6-211ENST00000572369 FDPSP14324 419 aaKnown RBP8.82□□□□□ -1
SMG6-211ENST00000572369 KCNA2P16389 499 aa8.82□□□□□ -1
SMG6-211ENST00000572369 USP11P51784 963 aa8.82□□□□□ -1
SMG6-211ENST00000572369 HMGN5P82970 282 aaKnown RBP8.82□□□□□ -1
SMG6-211ENST00000572369 PTPN11Q06124 597 aaPredicted RBP8.82□□□□□ -1
SMG6-211ENST00000572369 PTGISQ16647 500 aa8.82□□□□□ -1
SMG6-211ENST00000572369 INF2Q27J81 1249 aa8.82□□□□□ -1
SMG6-211ENST00000572369 NFRKBQ6P4R8 1299 aa8.82□□□□□ -1
SMG6-211ENST00000572369 PIK3AP1Q6ZUJ8 805 aa8.82□□□□□ -1
SMG6-211ENST00000572369 HFE2Q6ZVN8 426 aa8.82□□□□□ -1
SMG6-211ENST00000572369 TMEM199Q8N511 208 aa8.82□□□□□ -1
SMG6-211ENST00000572369 CCDC155Q8N6L0 562 aa8.82□□□□□ -1
SMG6-211ENST00000572369 SLC43A3Q8NBI5 491 aa8.82□□□□□ -1
SMG6-211ENST00000572369 GLG1Q92896 1179 aa8.82□□□□□ -1
SMG6-211ENST00000572369 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
SMG6-211ENST00000572369 C8orf76Q96K31 380 aa8.82□□□□□ -1
SMG6-211ENST00000572369 GPR20Q99678 358 aa8.82□□□□□ -1
SMG6-211ENST00000572369 HIPK3Q9H422 1215 aa8.82□□□□□ -1
SMG6-211ENST00000572369 AGO4Q9HCK5 861 aaKnown RBP8.82□□□□□ -1
SMG6-211ENST00000572369 TRMT13Q9NUP7 481 aaKnown RBP8.82□□□□□ -1
SMG6-211ENST00000572369 HDAC6Q9UBN7 1215 aa8.82□□□□□ -1
SMG6-211ENST00000572369 KIF3AQ9Y496 699 aa8.82□□□□□ -1
SMG6-211ENST00000572369 SAMM50Q9Y512 469 aa8.82□□□□□ -1
SMG6-211ENST00000572369 NFASCO94856 1347 aa8.81□□□□□ -1
SMG6-211ENST00000572369 NCOR2Q9Y618 2525 aa8.81□□□□□ -1
SMG6-211ENST00000572369 C17orf102A2RUQ5 167 aa8.81□□□□□ -1
SMG6-211ENST00000572369 IPO5O00410 1097 aaKnown RBP8.81□□□□□ -1
SMG6-211ENST00000572369 BACH1O14867 736 aa8.81□□□□□ -1
SMG6-211ENST00000572369 KIAA0355O15063 1070 aa8.81□□□□□ -1
SMG6-211ENST00000572369 TIMP1P01033 207 aa8.81□□□□□ -1
SMG6-211ENST00000572369 CD4P01730 458 aa8.81□□□□□ -1
SMG6-211ENST00000572369 CYP2C9P11712 490 aa8.81□□□□□ -1
SMG6-211ENST00000572369 GUCY1B3Q02153 619 aa8.81□□□□□ -1
SMG6-211ENST00000572369 FPGSQ05932 587 aa8.81□□□□□ -1
SMG6-211ENST00000572369 LETM2Q2VYF4 491 aa8.81□□□□□ -1
SMG6-211ENST00000572369 KRT40Q6A162 431 aa8.81□□□□□ -1
SMG6-211ENST00000572369 NEK8Q86SG6 692 aa8.81□□□□□ -1
SMG6-211ENST00000572369 TRIM50Q86XT4 487 aa8.81□□□□□ -1
SMG6-211ENST00000572369 GJD3Q8N144 294 aa8.81□□□□□ -1
SMG6-211ENST00000572369 RETREG2Q8NC44 543 aa8.81□□□□□ -1
SMG6-211ENST00000572369 KAT2BQ92831 832 aa8.81□□□□□ -1
SMG6-211ENST00000572369 TMX3Q96JJ7 454 aa8.81□□□□□ -1
SMG6-211ENST00000572369 MFSD14AQ96MC6 490 aa8.81□□□□□ -1
SMG6-211ENST00000572369 C16orf70Q9BSU1 422 aa8.81□□□□□ -1
SMG6-211ENST00000572369 TBC1D22BQ9NU19 505 aa8.81□□□□□ -1
SMG6-211ENST00000572369 GTF2IRD1Q9UHL9 959 aa8.81□□□□□ -1
SMG6-211ENST00000572369 DMDP11532 3685 aa8.81□□□□□ -1
SMG6-211ENST00000572369 ZNF292O60281 2723 aa8.81□□□□□ -1
SMG6-211ENST00000572369 MYH9P35579 1960 aaKnown RBP8.81□□□□□ -1
SMG6-211ENST00000572369 IGLV3-22A0A075B6J6 115 aa8.8□□□□□ -1
SMG6-211ENST00000572369 GSTTP1A0A1W2PQM5 241 aa8.8□□□□□ -1
SMG6-211ENST00000572369 M0R2N6 131 aa8.8□□□□□ -1
SMG6-211ENST00000572369 CCNT1O60563 726 aaKnown RBP8.8□□□□□ -1
SMG6-211ENST00000572369 GAS7O60861 476 aa8.8□□□□□ -1
SMG6-211ENST00000572369 TDP2O95551 362 aa8.8□□□□□ -1
SMG6-211ENST00000572369 MMP1P03956 469 aa8.8□□□□□ -1
SMG6-211ENST00000572369 GNAT1P11488 350 aa8.8□□□□□ -1
SMG6-211ENST00000572369 HOXD8P13378 290 aaPredicted RBP8.8□□□□□ -1
SMG6-211ENST00000572369 MARK3P27448 753 aa8.8□□□□□ -1
SMG6-211ENST00000572369 CIITAP33076 1130 aa8.8□□□□□ -1
SMG6-211ENST00000572369 CYP2C18P33260 490 aa8.8□□□□□ -1
SMG6-211ENST00000572369 CCL23P55773 120 aa8.8□□□□□ -1
SMG6-211ENST00000572369 ACTR2P61160 394 aa8.8□□□□□ -1
SMG6-211ENST00000572369 ST3GAL1Q11201 340 aa8.8□□□□□ -1
SMG6-211ENST00000572369 NR5A1Q13285 461 aa8.8□□□□□ -1
SMG6-211ENST00000572369 ITGB3BPQ13352 177 aaPredicted RBP8.8□□□□□ -1
SMG6-211ENST00000572369 PPIGQ13427 754 aaKnown RBP eCLIP8.8□□□□□ -15e-6■□□□□ 11.2
SMG6-211ENST00000572369 BFSP2Q13515 415 aa8.8□□□□□ -1
SMG6-211ENST00000572369 LRCH2Q5VUJ6 765 aa8.8□□□□□ -1
SMG6-211ENST00000572369 FAM160B1Q5W0V3 765 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms