RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SENP7Q9BQF6 1050 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
CHMP6-202ENST00000571457 DMDP11532 3685 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 EP300Q09472 2414 aaPredicted RBP13.1□□□□□ -0.31
CHMP6-202ENST00000571457 B4E1Z4 1266 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 PPP1R11O60927 126 aaPredicted RBP13.1□□□□□ -0.31
CHMP6-202ENST00000571457 GLP2RO95838 553 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 UBE3AQ05086 875 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 IFIT1BQ5T764 474 aaKnown RBP13.1□□□□□ -0.31
CHMP6-202ENST00000571457 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 FAM43BQ6ZT52 329 aaPredicted RBP13.1□□□□□ -0.31
CHMP6-202ENST00000571457 ZBTB33Q86T24 672 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 STAG2Q8N3U4 1231 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 MICAL1Q8TDZ2 1067 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 CDCA3Q99618 268 aaPredicted RBP13.1□□□□□ -0.31
CHMP6-202ENST00000571457 KRT23Q9C075 422 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 CNNM2Q9H8M5 875 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 TUBE1Q9UJT0 475 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
CHMP6-202ENST00000571457 H0Y858 1186 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
CHMP6-202ENST00000571457 MRPS6P82932 125 aaKnown RBP13.09□□□□□ -0.31
CHMP6-202ENST00000571457 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
CHMP6-202ENST00000571457 SP4Q02446 784 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 IER5Q5VY09 327 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 PDE12Q6L8Q7 609 aaKnown RBP13.09□□□□□ -0.31
CHMP6-202ENST00000571457 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 RUFY4Q6ZNE9 571 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 SUSD6Q92537 303 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 TLR9Q9NR96 1032 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 AAASQ9NRG9 546 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
CHMP6-202ENST00000571457 ERAP1Q9NZ08 941 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 PCDHB12Q9Y5F1 795 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 CDY2AQ9Y6F7 541 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 FRMPD4Q14CM0 1322 aa13.09□□□□□ -0.31
CHMP6-202ENST00000571457 MBLAC1A4D2B0 266 aaPredicted RBP13.08□□□□□ -0.32
CHMP6-202ENST00000571457 PALM3A6NDB9 673 aaPredicted RBP13.08□□□□□ -0.32
CHMP6-202ENST00000571457 M0QZ92 97 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 SCG2P13521 617 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 CD52P31358 61 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
CHMP6-202ENST00000571457 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 GRIK4Q16099 956 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 IMMTQ16891 758 aaKnown RBP13.08□□□□□ -0.32
CHMP6-202ENST00000571457 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
CHMP6-202ENST00000571457 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 CRIPAKQ8N1N5 446 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 DNAJB3Q8WWF6 145 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 MAD2L2Q9UI95 211 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 LRFN2Q9ULH4 789 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
CHMP6-202ENST00000571457 VPS13AQ96RL7 3174 aa13.08□□□□□ -0.32
CHMP6-202ENST00000571457 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
CHMP6-202ENST00000571457 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 RRN3P2A6NIE6 340 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 PPFIA3O75145 1194 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 PAK2Q13177 524 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 SPOUT1Q5T280 376 aaKnown RBP13.07□□□□□ -0.32
CHMP6-202ENST00000571457 UBALD2Q8IYN6 164 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 LINC01599Q8WXQ3 324 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 GLG1Q92896 1179 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
CHMP6-202ENST00000571457 RILPL2Q969X0 211 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 PIGSQ96S52 555 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 AGO3Q9H9G7 860 aaKnown RBP13.07□□□□□ -0.32
CHMP6-202ENST00000571457 NR2E1Q9Y466 385 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 EPG5Q9HCE0 2579 aa13.07□□□□□ -0.32
CHMP6-202ENST00000571457 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 DOCK5Q9H7D0 1870 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 PER2O15055 1255 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 NBL1P41271 181 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 DUSP6Q16828 381 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 PCNX4Q63HM2 1172 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 ASCL5Q7RTU5 278 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 RTN4RL1Q86UN2 441 aaPredicted RBP13.06□□□□□ -0.32
CHMP6-202ENST00000571457 SEPT1Q8WYJ6 367 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 SMARCAD1Q9H4L7 1026 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 RIOX1Q9H6W3 641 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 PADI3Q9ULW8 664 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
CHMP6-202ENST00000571457 HOXB8P17481 243 aaPredicted RBP13.05□□□□□ -0.32
CHMP6-202ENST00000571457 SDSP20132 328 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 MTMR3Q13615 1198 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 MARCH8Q5T0T0 291 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 TMEM184AQ6ZMB5 413 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 KREMEN2Q8NCW0 462 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms