RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
CHD3-213ENST00000571249 DBNDD2Q9BQY9 259 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHD3-213ENST00000571249 FBXO4Q9UKT5 387 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 USTQ9Y2C2 406 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 SALL2Q9Y467 1007 aaPredicted RBP8.26□□□□□ -1.09
CHD3-213ENST00000571249 FARP1Q9Y4F1 1045 aaPredicted RBP8.26□□□□□ -1.09
CHD3-213ENST00000571249 NAV1Q8NEY1 1877 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 UBR5O95071 2799 aaPredicted RBP8.25□□□□□ -1.09
CHD3-213ENST00000571249 ITPR3Q14573 2671 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 MAGEB6P1A0A0J9YX57 407 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 NKRFO15226 690 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHD3-213ENST00000571249 SRGAP3O43295 1099 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 ALAS1P13196 640 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 PLA2G2AP14555 144 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 MTHFRP42898 656 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 CDK8P49336 464 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 ITIH3Q06033 890 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 CSRP2Q16527 193 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 KIAA0753Q2KHM9 967 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 PHLDB3Q6NSJ2 640 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 NSMFQ6X4W1 530 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 SERINC5Q86VE9 423 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 WDR63Q8IWG1 891 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 GLIS3Q8NEA6 775 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 PJA1Q8NG27 643 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 RASGRP4Q8TDF6 673 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 GPR152Q8TDT2 470 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 SDR42E1Q8WUS8 393 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 NELL1Q92832 810 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 SCNM1Q9BWG6 230 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
CHD3-213ENST00000571249 FEM1BQ9UK73 627 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 MTF2Q9Y483 593 aaPredicted RBP8.25□□□□□ -1.09
CHD3-213ENST00000571249 PTPRCP08575 1304 aa8.25□□□□□ -1.09
CHD3-213ENST00000571249 KIAA1671Q9BY89 1806 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 CYP2D7A0A087X1C5 515 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 PATL2C9JE40 543 aaKnown RBP8.24□□□□□ -1.09
CHD3-213ENST00000571249 RETP07949 1114 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 ZNF286BP0CG31 522 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 ALDH5A1P51649 535 aaPredicted RBP8.24□□□□□ -1.09
CHD3-213ENST00000571249 BAATQ14032 418 aaPredicted RBP8.24□□□□□ -1.09
CHD3-213ENST00000571249 LY6KQ17RY6 165 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 TKFCQ3LXA3 575 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 ATAT1Q5SQI0 421 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 XRRA1Q6P2D8 792 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 DHX37Q8IY37 1157 aaKnown RBP8.24□□□□□ -1.09
CHD3-213ENST00000571249 ST13P5Q8NFI4 369 aaPredicted RBP8.24□□□□□ -1.09
CHD3-213ENST00000571249 CHMP4CQ96CF2 233 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 BORCS6Q96GS4 357 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 LSM14BQ9BX40 385 aaKnown RBP8.24□□□□□ -1.09
CHD3-213ENST00000571249 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
CHD3-213ENST00000571249 TMEM260Q9NX78 707 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 HCFC2Q9Y5Z7 792 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 LCTP09848 1927 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 TTC3P53804 2025 aa8.24□□□□□ -1.09
CHD3-213ENST00000571249 TICRRQ7Z2Z1 1910 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 HAS3O00219 553 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 MAP3K13O43283 966 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 C1QL1O75973 258 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 FGF18O76093 207 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 MS4A1P11836 297 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 CASTP20810 708 aaKnown RBP8.23□□□□□ -1.09
CHD3-213ENST00000571249 C19orf57Q0VDD7 668 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 G3BP1Q13283 466 aaKnown RBP eCLIP8.23□□□□□ -1.09
CHD3-213ENST00000571249 LAIR1Q6GTX8 287 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 CMTR2Q8IYT2 770 aaKnown RBP8.23□□□□□ -1.09
CHD3-213ENST00000571249 SLC44A3Q8N4M1 653 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 SCFD2Q8WU76 684 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 PIK3R5Q8WYR1 880 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 ZNF512BQ96KM6 892 aaPredicted RBP8.23□□□□□ -1.09
CHD3-213ENST00000571249 ARHGEF3Q9NR81 526 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 HDAC5Q9UQL6 1122 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 APC2O95996 2303 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 ACACAQ13085 2346 aa8.23□□□□□ -1.09
CHD3-213ENST00000571249 RALGAPA1Q6GYQ0 2036 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 FSD2A1L4K1 749 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 ARHGAP6O43182 974 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 TREHO43280 583 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 LRP3O75074 770 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 N4BP1O75113 896 aaKnown RBP8.22□□□□□ -1.09
CHD3-213ENST00000571249 ARHGAP1Q07960 439 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 SF3A2Q15428 464 aaKnown RBP8.22□□□□□ -1.09
CHD3-213ENST00000571249 KIAA1841Q6NSI8 718 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 CCDC62Q6P9F0 684 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 DCLRE1AQ6PJP8 1040 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 RTN4RL1Q86UN2 441 aaPredicted RBP8.22□□□□□ -1.09
CHD3-213ENST00000571249 LINC01599Q8WXQ3 324 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 CASP10Q92851 521 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 APBB2Q92870 758 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 ACSF2Q96CM8 615 aaPredicted RBP8.22□□□□□ -1.09
CHD3-213ENST00000571249 POM121Q96HA1 1249 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 TCF25Q9BQ70 676 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 ANTXR1Q9H6X2 564 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 PLSCR2Q9NRY7 297 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 ADD3Q9UEY8 706 aaKnown RBP8.22□□□□□ -1.09
CHD3-213ENST00000571249 RAB23Q9ULC3 237 aa8.22□□□□□ -1.09
CHD3-213ENST00000571249 LAMA1P25391 3075 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms